Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:34640405-34662461

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D3Mit168	3	34640701 to 34640804	103		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 168
Cpgi13070	3	34640778 to 34640938	160		CpG island	CpG island 13070
Cpgi13071	3	34641993 to 34642832	839		CpG island	CpG island 13071
Tssr28820	3	34643115 to 34643120	5	+	TSS region	transcription start site region 28820
Gm42692	3	34643264 to 34646096	2832	+	unclassified gene	predicted gene 42692
Tssr32975	3	34648485 to 34648489	4	-	TSS region	transcription start site region 32975
Cpgi13072	3	34648719 to 34651529	2810		CpG island	CpG island 13072
Tssr32976	3	34648952 to 34648963	11	-	TSS region	transcription start site region 32976
Tssr32977	3	34649724 to 34649735	11	-	TSS region	transcription start site region 32977
Tssr32978	3	34649756 to 34649769	13	-	TSS region	transcription start site region 32978
Tssr32979	3	34649847 to 34649875	28	-	TSS region	transcription start site region 32979
Tssr28821	3	34649923 to 34649934	11	+	TSS region	transcription start site region 28821
Tssr28822	3	34649987 to 34650005	18	+	TSS region	transcription start site region 28822
Tssr28823	3	34650024 to 34650050	26	+	TSS region	transcription start site region 28823
Tssr28824	3	34650174 to 34650189	15	+	TSS region	transcription start site region 28824
Tssr28825	3	34650222 to 34650233	11	+	TSS region	transcription start site region 28825
Sox2	3	34650405 to 34652461	2056	+	protein coding gene	SRY (sex determining region Y)-box 2
Tssr32980	3	34650714 to 34650720	6	-	TSS region	transcription start site region 32980
Tssr28826	3	34650766 to 34650780	14	+	TSS region	transcription start site region 28826
Tssr32981	3	34651036 to 34651047	11	-	TSS region	transcription start site region 32981
Tssr28827	3	34651071 to 34651082	11	+	TSS region	transcription start site region 28827
Gm27611	3	34653178 to 34653285	107	+	unclassified non-coding RNA gene	predicted gene, 27611
Tssr28828	3	34653586 to 34653593	7	+	TSS region	transcription start site region 28828
Tssr32982	3	34653989 to 34654008	19	-	TSS region	transcription start site region 32982
Cpgi13073	3	34661575 to 34661869	294		CpG island	CpG island 13073