Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:33872064-34242071

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930431L21Rik 3 33866813 to 33897584 30771 - lincRNA gene RIKEN cDNA 4930431L21 gene
Gm42204 3 33906845 to 33908227 1382 + lncRNA gene predicted gene, 42204
4930502C17Rik 3 33956200 to 33957147 947 + unclassified gene RIKEN cDNA 4930502C17 gene
Gm23175 3 33959069 to 33959200 131 - snoRNA gene predicted gene, 23175
Gm46833 3 33972181 to 33975453 3272 - lncRNA gene predicted gene, 46833
Tssr32966 3 33990596 to 33990606 10 - TSS region transcription start site region 32966
Gm9791 3 34005017 to 34005463 446 - pseudogene predicted pseudogene 9791
Tssr32967 3 34005490 to 34005514 24 - TSS region transcription start site region 32967
Gm46798 3 34008804 to 34011883 3079 - lncRNA gene predicted gene, 46798
Gm43077 3 34017708 to 34019882 2174 - lincRNA gene predicted gene 43077
Cpgi13066 3 34019454 to 34021055 1601 CpG island CpG island 13066
Tssr32968 3 34019797 to 34019812 15 - TSS region transcription start site region 32968
Tssr28785 3 34019869 to 34019883 14 + TSS region transcription start site region 28785
Tssr28786 3 34019901 to 34019916 15 + TSS region transcription start site region 28786
Tssr28787 3 34019917 to 34019926 9 + TSS region transcription start site region 28787
Tssr28788 3 34019932 to 34019939 7 + TSS region transcription start site region 28788
Tssr28789 3 34019947 to 34019963 16 + TSS region transcription start site region 28789
Fxr1 3 34020058 to 34069980 49922 + protein coding gene fragile X mental retardation gene 1, autosomal homolog
Tssr28790 3 34020075 to 34020082 7 + TSS region transcription start site region 28790
Tssr28791 3 34020083 to 34020110 27 + TSS region transcription start site region 28791
Tssr28792 3 34041092 to 34041107 15 + TSS region transcription start site region 28792
Tssr28793 3 34046061 to 34046078 17 + TSS region transcription start site region 28793
Tssr28794 3 34046430 to 34046474 44 + TSS region transcription start site region 28794
Tssr28795 3 34052271 to 34052275 4 + TSS region transcription start site region 28795
Gm43667 3 34054335 to 34055429 1094 - unclassified gene predicted gene 43667
Tssr28796 3 34057064 to 34057071 7 + TSS region transcription start site region 28796
Dnajc19 3 34057280 to 34081354 24074 - protein coding gene DnaJ heat shock protein family (Hsp40) member C19
Tssr28797 3 34069393 to 34069402 9 + TSS region transcription start site region 28797
Gm43668 3 34070659 to 34076000 5341 + unclassified gene predicted gene 43668
Tssr32969 3 34079037 to 34079052 15 - TSS region transcription start site region 32969
Tssr32970 3 34079060 to 34079069 9 - TSS region transcription start site region 32970
Cpgi13067 3 34080932 to 34081556 624 CpG island CpG island 13067
Tssr32971 3 34081256 to 34081347 91 - TSS region transcription start site region 32971
Tssr28798 3 34104437 to 34104447 10 + TSS region transcription start site region 28798
Tssr28799 3 34104448 to 34104475 27 + TSS region transcription start site region 28799
Tssr28800 3 34104481 to 34104496 15 + TSS region transcription start site region 28800
Tssr28801 3 34158726 to 34158728 2 + TSS region transcription start site region 28801
Gm5708 3 34183309 to 34184177 868 + pseudogene predicted gene 5708
Tssr28802 3 34196742 to 34196756 14 + TSS region transcription start site region 28802
Tssr28803 3 34196777 to 34196790 13 + TSS region transcription start site region 28803
Tssr28804 3 34196922 to 34196933 11 + TSS region transcription start site region 28804
Tssr28805 3 34202675 to 34202679 4 + TSS region transcription start site region 28805