MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:33406578-33836590

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm34205	3	33540268 to 33543422	3154	+	lncRNA gene	predicted gene, 34205
Tssr28780	3	33621578 to 33621590	12	+	TSS region	transcription start site region 28780
Gm5845	3	33621608 to 33622403	795	+	pseudogene	predicted gene 5845
Gm42694	3	33684508 to 33684865	357	-	pseudogene	predicted gene 42694
Gm42203	3	33686964 to 33692001	5037	-	lncRNA gene	predicted gene, 42203
Gm43666	3	33703355 to 33759616	56261	-	lincRNA gene	predicted gene 43666
Tssr858	3	33720115 to 33720120	5	+	TSS region	transcription start site region 858
Gm18611	3	33730667 to 33731350	683	+	pseudogene	predicted gene, 18611
Del(3)3Lt	3	33746227 to 33750515	4288		cytogenetic marker	deletion, Chr 3, Edward H Leiter 3
Cpgi13065	3	33799573 to 33800756	1183		CpG island	CpG island 13065
Tssr28781	3	33799791 to 33799809	18	+	TSS region	transcription start site region 28781
Ttc14	3	33800022 to 33814860	14838	+	protein coding gene	tetratricopeptide repeat domain 14
Tssr28782	3	33800144 to 33800153	9	+	TSS region	transcription start site region 28782
Tssr28783	3	33800158 to 33800234	76	+	TSS region	transcription start site region 28783
Tssr32962	3	33801683 to 33801694	11	-	TSS region	transcription start site region 32962
Tssr28784	3	33807274 to 33807286	12	+	TSS region	transcription start site region 28784
Ccdc39	3	33812362 to 33844310	31948	-	protein coding gene	coiled-coil domain containing 39
Tssr32963	3	33812733 to 33812736	3	-	TSS region	transcription start site region 32963
Gm43140	3	33817256 to 33817946	690	+	antisense lncRNA gene	predicted gene 43140