MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:31185587-31416891

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cfq8	3	24714068 to 31277954	6563886		QTL	conditioned fear QTL 8
Slc7a14	3	31202858 to 31310378	107520	-	protein coding gene	solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
Tssr32912	3	31208066 to 31208076	10	-	TSS region	transcription start site region 32912
Cpgi13052	3	31209195 to 31209348	153		CpG island	CpG island 13052
Tssr28730	3	31220057 to 31220070	13	+	TSS region	transcription start site region 28730
Tssr32913	3	31225211 to 31225213	2	-	TSS region	transcription start site region 32913
Tssr28731	3	31228479 to 31228481	2	+	TSS region	transcription start site region 28731
Gm33834	3	31232620 to 31237362	4742	+	lncRNA gene	predicted gene, 33834
D3Mit151	3	31238343 to 31238491	148		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 151
D3Dcr3	3	31247299 to 31247394	95		DNA segment	DNA Segment, Chr 3, Derry C. Roopenian 3
Gm15496	3	31285587 to 31316891	31304	+	antisense lncRNA gene	predicted gene 15496
Cpgi13053	3	31309144 to 31310392	1248		CpG island	CpG island 13053
Tssr32914	3	31310218 to 31310231	13	-	TSS region	transcription start site region 32914
Tssr32915	3	31310246 to 31310265	19	-	TSS region	transcription start site region 32915
Tssr32916	3	31310267 to 31310324	57	-	TSS region	transcription start site region 32916
Tssr32917	3	31310349 to 31310373	24	-	TSS region	transcription start site region 32917
Tssr32918	3	31330937 to 31330940	3	-	TSS region	transcription start site region 32918
Gm38025	3	31341012 to 31345280	4268	+	lincRNA gene	predicted gene, 38025