MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:30506658-30617129

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mecom	3	29951296 to 30509783	558487	-	protein coding gene	MDS1 and EVI1 complex locus
Cpgi13035	3	30507344 to 30509642	2298		CpG island	CpG island 13035
Tssr32895	3	30509462 to 30509509	47	-	TSS region	transcription start site region 32895
Tssr32896	3	30509681 to 30509746	65	-	TSS region	transcription start site region 32896
Tssr32897	3	30509752 to 30509794	42	-	TSS region	transcription start site region 32897
Cpgi13036	3	30514135 to 30515678	1543		CpG island	CpG island 13036
D3Mit222	3	30535747 to 30535882	135		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 222
Gm38258	3	30552697 to 30564243	11546	-	lincRNA gene	predicted gene, 38258
Gm38153	3	30561658 to 30562129	471	-	pseudogene	predicted gene, 38153
Cpgi13037	3	30595016 to 30595811	795		CpG island	CpG island 13037
1600017P15Rik	3	30595346 to 30595757	411	-	unclassified gene	RIKEN cDNA 1600017P15 gene
Actrt3	3	30597073 to 30599870	2797	-	protein coding gene	actin related protein T3
Cpgi13038	3	30599632 to 30599989	357		CpG island	CpG island 13038
Tssr32898	3	30599863 to 30599886	23	-	TSS region	transcription start site region 32898
n-TVaac8	3	30601270 to 30601342	72	+	tRNA gene	nuclear encoded tRNA valine 8 (anticodon AAC)
Tssr28679	3	30602056 to 30602096	40	+	TSS region	transcription start site region 28679
Mynn	3	30602087 to 30619873	17786	+	protein coding gene	myoneurin
Cpgi13039	3	30602219 to 30603116	897		CpG island	CpG island 13039
Tssr28680	3	30602617 to 30602653	36	+	TSS region	transcription start site region 28680