Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:30502087-30719873

35 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mecom	3	29951296 to 30509783	558487	-	protein coding gene	MDS1 and EVI1 complex locus
Gm37652	3	30501719 to 30503813	2094	-	unclassified gene	predicted gene, 37652
Cpgi13035	3	30507344 to 30509642	2298		CpG island	CpG island 13035
Tssr32895	3	30509462 to 30509509	47	-	TSS region	transcription start site region 32895
Tssr32896	3	30509681 to 30509746	65	-	TSS region	transcription start site region 32896
Tssr32897	3	30509752 to 30509794	42	-	TSS region	transcription start site region 32897
Cpgi13036	3	30514135 to 30515678	1543		CpG island	CpG island 13036
D3Mit222	3	30535747 to 30535882	135		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 222
Gm38258	3	30552697 to 30564243	11546	-	lincRNA gene	predicted gene, 38258
Gm38153	3	30561658 to 30562129	471	-	pseudogene	predicted gene, 38153
Cpgi13037	3	30595016 to 30595811	795		CpG island	CpG island 13037
1600017P15Rik	3	30595346 to 30595757	411	-	unclassified gene	RIKEN cDNA 1600017P15 gene
Actrt3	3	30597073 to 30599870	2797	-	protein coding gene	actin related protein T3
Cpgi13038	3	30599632 to 30599989	357		CpG island	CpG island 13038
Tssr32898	3	30599863 to 30599886	23	-	TSS region	transcription start site region 32898
n-TVaac8	3	30601270 to 30601342	72	+	tRNA gene	nuclear encoded tRNA valine 8 (anticodon AAC)
Tssr28679	3	30602056 to 30602096	40	+	TSS region	transcription start site region 28679
Mynn	3	30602087 to 30619873	17786	+	protein coding gene	myoneurin
Cpgi13039	3	30602219 to 30603116	897		CpG island	CpG island 13039
Tssr28680	3	30602617 to 30602653	36	+	TSS region	transcription start site region 28680
Lrrc34	3	30624267 to 30647818	23551	-	protein coding gene	leucine rich repeat containing 34
Lrriq4	3	30644507 to 30672431	27924	+	protein coding gene	leucine-rich repeats and IQ motif containing 4
Cpgi13040	3	30647537 to 30647863	326		CpG island	CpG island 13040
Tssr32899	3	30647752 to 30647770	18	-	TSS region	transcription start site region 32899
Tssr32900	3	30647779 to 30647782	3	-	TSS region	transcription start site region 32900
Tssr32901	3	30647793 to 30647876	83	-	TSS region	transcription start site region 32901
Tssr28681	3	30647923 to 30647934	11	+	TSS region	transcription start site region 28681
Tssr28682	3	30647958 to 30647977	19	+	TSS region	transcription start site region 28682
Tssr28683	3	30647993 to 30648007	14	+	TSS region	transcription start site region 28683
Cpgi13041	3	30650106 to 30650991	885		CpG island	CpG island 13041
Lrrc31	3	30679058 to 30699843	20785	-	protein coding gene	leucine rich repeat containing 31
Gm15462	3	30686085 to 30692366	6281	+	antisense lncRNA gene	predicted gene 15462
Tssr32902	3	30699765 to 30699803	38	-	TSS region	transcription start site region 32902
Tssr32903	3	30699855 to 30699872	17	-	TSS region	transcription start site region 32903
Cpgi13042	3	30701363 to 30701729	366		CpG island	CpG island 13042