MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:28893468-29233630

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm33102	3	28883456 to 28897284	13828	-	lncRNA gene	predicted gene, 33102
Gm1527	3	28892617 to 28926724	34107	+	protein coding gene	predicted gene 1527
Tssr28663	3	28893723 to 28893727	4	+	TSS region	transcription start site region 28663
Tssr32872	3	28897157 to 28897171	14	-	TSS region	transcription start site region 32872
Tssr850	3	28956371 to 28956378	7	+	TSS region	transcription start site region 850
Tssr28664	3	28986639 to 28986642	3	+	TSS region	transcription start site region 28664
Gm33154	3	29043768 to 29045547	1779	-	lncRNA gene	predicted gene, 33154
D3Mit93	3	29063468 to 29063630	162		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 93
Egfem1	3	29082023 to 29691209	609186	+	protein coding gene	EGF-like and EMI domain containing 1
Cpgi13030	3	29082253 to 29083130	877		CpG island	CpG island 13030
Tssr28665	3	29082539 to 29082590	51	+	TSS region	transcription start site region 28665
D3Mit118	3	29083300 to 29083442	142		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 118
Tssr28666	3	29109801 to 29109807	6	+	TSS region	transcription start site region 28666
Tssr28667	3	29154218 to 29154226	8	+	TSS region	transcription start site region 28667
Gm38029	3	29174838 to 29176927	2089	+	unclassified gene	predicted gene, 38029
Tssr28668	3	29198768 to 29198770	2	+	TSS region	transcription start site region 28668
D230021J17Rik	3	29209341 to 29211977	2636		unclassified gene	RIKEN cDNA D230021J17 gene
Gm37965	3	29219887 to 29221248	1361	+	unclassified gene	predicted gene, 37965