Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cfq8 | 3 | 6563886 | QTL | conditioned fear QTL 8 | ||
Eif5a2 | 3 | 17570 | + | protein coding gene | eukaryotic translation initiation factor 5A2 | |
Gm32950 | 3 | 2532 | - | lincRNA gene | predicted gene, 32950 | |
Cpgi13029 | 3 | 840 | CpG island | CpG island 13029 | ||
Tssr32869 | 3 | 32 | - | TSS region | transcription start site region 32869 | |
Rpl22l1 | 3 | 1980 | + | protein coding gene | ribosomal protein L22 like 1 | |
Tssr28661 | 3 | 23 | + | TSS region | transcription start site region 28661 | |
Gm33051 | 3 | 5996 | - | antisense lncRNA gene | predicted gene, 33051 | |
Tssr32870 | 3 | 11 | - | TSS region | transcription start site region 32870 | |
Tssr32871 | 3 | 11 | - | TSS region | transcription start site region 32871 | |
D3Mit369 | 3 | 110 | DNA segment | DNA Segment, Chr 3, Massachusetts Institute of Technology-369 | ||
Gm37867 | 3 | 2224 | - | lincRNA gene | predicted gene, 37867 | |
Gm37924 | 3 | 3646 | + | unclassified gene | predicted gene, 37924 | |
Gm33102 | 3 | 13828 | - | lncRNA gene | predicted gene, 33102 | |
Gm1527 | 3 | 34107 | + | protein coding gene | predicted gene 1527 | |
Tssr28662 | 3 | 2 | + | TSS region | transcription start site region 28662 | |
Tssr28663 | 3 | 4 | + | TSS region | transcription start site region 28663 | |
Tssr32872 | 3 | 14 | - | TSS region | transcription start site region 32872 | |
Tssr850 | 3 | 7 | + | TSS region | transcription start site region 850 | |
Tssr28664 | 3 | 3 | + | TSS region | transcription start site region 28664 | |
Gm33154 | 3 | 1779 | - | lncRNA gene | predicted gene, 33154 | |
D3Mit93 | 3 | 162 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 93 | ||
Egfem1 | 3 | 609186 | + | protein coding gene | EGF-like and EMI domain containing 1 | |
Cpgi13030 | 3 | 877 | CpG island | CpG island 13030 | ||
Tssr28665 | 3 | 51 | + | TSS region | transcription start site region 28665 | |
D3Mit118 | 3 | 142 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 118 | ||
Tssr28666 | 3 | 6 | + | TSS region | transcription start site region 28666 | |
Tssr28667 | 3 | 8 | + | TSS region | transcription start site region 28667 | |
Gm38029 | 3 | 2089 | + | unclassified gene | predicted gene, 38029 | |
Tssr28668 | 3 | 2 | + | TSS region | transcription start site region 28668 | |
D230021J17Rik | 3 | 2636 | unclassified gene | RIKEN cDNA D230021J17 gene | ||
Gm37965 | 3 | 1361 | + | unclassified gene | predicted gene, 37965 | |
Tssr28669 | 3 | 4 | + | TSS region | transcription start site region 28669 | |
Tssr28670 | 3 | 3 | + | TSS region | transcription start site region 28670 | |
Tssr28671 | 3 | 4 | + | TSS region | transcription start site region 28671 | |
AA516838 | 3 | 562 | unclassified gene | expressed sequence AA516838 | ||
Tssr851 | 3 | 3 | + | TSS region | transcription start site region 851 | |
Tssr28672 | 3 | 9 | + | TSS region | transcription start site region 28672 | |
Tssr28673 | 3 | 4 | + | TSS region | transcription start site region 28673 | |
Mir551b | 3 | 97 | + | miRNA gene | microRNA 551b | |
Tssr28674 | 3 | 5 | + | TSS region | transcription start site region 28674 | |
Tssr28675 | 3 | 2 | + | TSS region | transcription start site region 28675 | |
Mir21b | 3 | 107 | + | miRNA gene | microRNA 21b | |
Gm42197 | 3 | 34047 | - | lncRNA gene | predicted gene, 42197 | |
Tssr28676 | 3 | 4 | + | TSS region | transcription start site region 28676 | |
Gm37557 | 3 | 138 | + | pseudogene | predicted gene, 37557 | |
Gm33206 | 3 | 119711 | - | lincRNA gene | predicted gene, 33206 | |
Tssr28677 | 3 | 23 | + | TSS region | transcription start site region 28677 | |
Mannr | 3 | 33174 | + | lincRNA gene | Mecom adjacent non-protein coding RNA | |
Gm37281 | 3 | 438 | + | pseudogene | predicted gene, 37281 | |
Mecom | 3 | 558487 | - | protein coding gene | MDS1 and EVI1 complex locus | |
Cpgi13031 | 3 | 363 | CpG island | CpG island 13031 | ||
Tssr28678 | 3 | 11 | + | TSS region | transcription start site region 28678 | |
Cpgi13032 | 3 | 337 | CpG island | CpG island 13032 | ||
Mecomos | 3 | 42429 | + | antisense lncRNA gene | MDS1 and EVI1 complex locus, opposite strand | |
Tssr32873 | 3 | 25 | - | TSS region | transcription start site region 32873 | |
Tssr32874 | 3 | 16 | - | TSS region | transcription start site region 32874 | |
Tssr32875 | 3 | 11 | - | TSS region | transcription start site region 32875 | |
Tssr32876 | 3 | 13 | - | TSS region | transcription start site region 32876 | |
Tssr32877 | 3 | 17 | - | TSS region | transcription start site region 32877 | |
Tssr32878 | 3 | 14 | - | TSS region | transcription start site region 32878 | |
Tssr32879 | 3 | 13 | - | TSS region | transcription start site region 32879 | |
Tssr32880 | 3 | 13 | - | TSS region | transcription start site region 32880 | |
D3Mit46.3 | 3 | 142 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 46.3 | ||
Tssr32881 | 3 | 20 | - | TSS region | transcription start site region 32881 | |
Tssr32882 | 3 | 11 | - | TSS region | transcription start site region 32882 | |
D3Mit46 | 3 | 165 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 46 | ||
D3Mit46.1 | 3 | 115 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 46.1 | ||
Tssr32883 | 3 | 3 | - | TSS region | transcription start site region 32883 | |
Tssr32884 | 3 | 12 | - | TSS region | transcription start site region 32884 | |
Tssr32885 | 3 | 12 | - | TSS region | transcription start site region 32885 | |
Cpgi13033 | 3 | 231 | CpG island | CpG island 13033 | ||
Tssr32886 | 3 | 5 | - | TSS region | transcription start site region 32886 | |
Tssr32887 | 3 | 26 | - | TSS region | transcription start site region 32887 | |
Gm38066 | 3 | 1633 | - | unclassified gene | predicted gene, 38066 | |
Tssr32888 | 3 | 19 | - | TSS region | transcription start site region 32888 | |
Tssr32889 | 3 | 14 | - | TSS region | transcription start site region 32889 | |
Tssr32890 | 3 | 5 | - | TSS region | transcription start site region 32890 | |
Tssr32891 | 3 | 4 | - | TSS region | transcription start site region 32891 | |
Gm38197 | 3 | 2121 | - | unclassified gene | predicted gene, 38197 | |
D3Mit271 | 3 | 104 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 271 | ||
Cpgi13034 | 3 | 255 | CpG island | CpG island 13034 | ||
Gm10258 | 3 | 2122 | - | unclassified non-coding RNA gene | predicted gene 10258 | |
Gm38362 | 3 | 2063 | - | unclassified gene | predicted gene, 38362 | |
9530010C24Rik | 3 | 1344 | unclassified gene | RIKEN cDNA 9530010C24 gene | ||
Tssr32892 | 3 | 1 | - | TSS region | transcription start site region 32892 | |
Tssr32893 | 3 | 13 | - | TSS region | transcription start site region 32893 | |
Lscc2 | 3 | 192 | QTL | lung squamous cell carcinoma 2 | ||
Mos3 | 3 | 20291792 | heritable phenotypic marker | modifier of Sox10 3 | ||
D3Mit178 | 3 | 192 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 178 | ||
Gm37024 | 3 | 867 | + | unclassified gene | predicted gene, 37024 | |
Tssr32894 | 3 | 3 | - | TSS region | transcription start site region 32894 | |
Gm37652 | 3 | 2094 | - | unclassified gene | predicted gene, 37652 | |
Cpgi13035 | 3 | 2298 | CpG island | CpG island 13035 | ||
Tssr32895 | 3 | 47 | - | TSS region | transcription start site region 32895 | |
Tssr32896 | 3 | 65 | - | TSS region | transcription start site region 32896 | |
Tssr32897 | 3 | 42 | - | TSS region | transcription start site region 32897 | |
Cpgi13036 | 3 | 1543 | CpG island | CpG island 13036 | ||
D3Mit222 | 3 | 135 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 222 | ||
Gm38258 | 3 | 11546 | - | lincRNA gene | predicted gene, 38258 | |
Gm38153 | 3 | 471 | - | pseudogene | predicted gene, 38153 | |
Cpgi13037 | 3 | 795 | CpG island | CpG island 13037 | ||
1600017P15Rik | 3 | 411 | - | unclassified gene | RIKEN cDNA 1600017P15 gene | |
Actrt3 | 3 | 2797 | - | protein coding gene | actin related protein T3 | |
Cpgi13038 | 3 | 357 | CpG island | CpG island 13038 | ||
Tssr32898 | 3 | 23 | - | TSS region | transcription start site region 32898 | |
n-TVaac8 | 3 | 72 | + | tRNA gene | nuclear encoded tRNA valine 8 (anticodon AAC) | |
Tssr28679 | 3 | 40 | + | TSS region | transcription start site region 28679 | |
Mynn | 3 | 17786 | + | protein coding gene | myoneurin | |
Cpgi13039 | 3 | 897 | CpG island | CpG island 13039 | ||
Tssr28680 | 3 | 36 | + | TSS region | transcription start site region 28680 | |
Lrrc34 | 3 | 23551 | - | protein coding gene | leucine rich repeat containing 34 | |
Lrriq4 | 3 | 27924 | + | protein coding gene | leucine-rich repeats and IQ motif containing 4 | |
Cpgi13040 | 3 | 326 | CpG island | CpG island 13040 | ||
Tssr32899 | 3 | 18 | - | TSS region | transcription start site region 32899 | |
Tssr32900 | 3 | 3 | - | TSS region | transcription start site region 32900 | |
Tssr32901 | 3 | 83 | - | TSS region | transcription start site region 32901 | |
Tssr28681 | 3 | 11 | + | TSS region | transcription start site region 28681 | |
Tssr28682 | 3 | 19 | + | TSS region | transcription start site region 28682 | |
Tssr28683 | 3 | 14 | + | TSS region | transcription start site region 28683 | |
Cpgi13041 | 3 | 885 | CpG island | CpG island 13041 | ||
Lrrc31 | 3 | 20785 | - | protein coding gene | leucine rich repeat containing 31 | |
Gm15462 | 3 | 6281 | + | antisense lncRNA gene | predicted gene 15462 | |
Tssr32902 | 3 | 38 | - | TSS region | transcription start site region 32902 | |
Tssr32903 | 3 | 17 | - | TSS region | transcription start site region 32903 | |
Cpgi13042 | 3 | 366 | CpG island | CpG island 13042 | ||
Tssr28684 | 3 | 2 | + | TSS region | transcription start site region 28684 | |
Tssr28685 | 3 | 25 | + | TSS region | transcription start site region 28685 | |
Samd7 | 3 | 20881 | + | protein coding gene | sterile alpha motif domain containing 7 | |
Tssr28686 | 3 | 16 | + | TSS region | transcription start site region 28686 | |
Gm33590 | 3 | 4345 | - | lncRNA gene | predicted gene, 33590 | |
Tssr28687 | 3 | 3 | + | TSS region | transcription start site region 28687 | |
4933429H19Rik | 3 | 994 | - | antisense lncRNA gene | RIKEN cDNA 4933429H19 gene | |
Cpgi13043 | 3 | 1335 | CpG island | CpG island 13043 | ||
Sec62 | 3 | 28388 | + | protein coding gene | SEC62 homolog (S. cerevisiae) | |
Tssr28688 | 3 | 34 | + | TSS region | transcription start site region 28688 | |
Tssr28689 | 3 | 17 | + | TSS region | transcription start site region 28689 | |
Tssr28690 | 3 | 19 | + | TSS region | transcription start site region 28690 | |
Tssr32904 | 3 | 27 | - | TSS region | transcription start site region 32904 | |
Tssr28691 | 3 | 52 | + | TSS region | transcription start site region 28691 | |
Tssr32905 | 3 | 46 | - | TSS region | transcription start site region 32905 | |
Tssr28692 | 3 | 12 | + | TSS region | transcription start site region 28692 | |
Tssr28693 | 3 | 17 | + | TSS region | transcription start site region 28693 | |
Tssr28694 | 3 | 43 | + | TSS region | transcription start site region 28694 | |
D3Dcr1 | 3 | 95 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 1 | ||
Gm38080 | 3 | 267 | - | pseudogene | predicted gene, 38080 | |
Gm42198 | 3 | 10456 | - | lncRNA gene | predicted gene, 42198 | |
Gm42199 | 3 | 3377 | - | lncRNA gene | predicted gene, 42199 | |
Cpgi13044 | 3 | 989 | CpG island | CpG island 13044 | ||
Tssr28695 | 3 | 28 | + | TSS region | transcription start site region 28695 | |
Tssr28696 | 3 | 56 | + | TSS region | transcription start site region 28696 | |
Gpr160 | 3 | 41242 | + | protein coding gene | G protein-coupled receptor 160 | |
Tssr28697 | 3 | 3 | + | TSS region | transcription start site region 28697 | |
Tssr28698 | 3 | 12 | + | TSS region | transcription start site region 28698 | |
Tssr28699 | 3 | 41 | + | TSS region | transcription start site region 28699 | |
Tssr28700 | 3 | 11 | + | TSS region | transcription start site region 28700 | |
Phc3 | 3 | 70044 | - | protein coding gene | polyhomeotic 3 | |
Tssr32906 | 3 | 44 | - | TSS region | transcription start site region 32906 | |
Tssr32907 | 3 | 16 | - | TSS region | transcription start site region 32907 | |
Tssr32908 | 3 | 24 | - | TSS region | transcription start site region 32908 | |
9530022L04Rik | 3 | 309 | - | unclassified gene | RIKEN cDNA 9530022L04 gene | |
Cpgi13045 | 3 | 1127 | CpG island | CpG island 13045 | ||
Tssr32909 | 3 | 26 | - | TSS region | transcription start site region 32909 | |
Gm2979 | 3 | 462 | + | pseudogene | predicted gene 2979 | |
Cpgi13046 | 3 | 1009 | CpG island | CpG island 13046 | ||
Prkci | 3 | 56998 | + | protein coding gene | protein kinase C, iota | |
Tssr28701 | 3 | 114 | + | TSS region | transcription start site region 28701 | |
D3Dcr2 | 3 | 106 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 2 | ||
Tssr28702 | 3 | 23 | + | TSS region | transcription start site region 28702 | |
Tssr28703 | 3 | 16 | + | TSS region | transcription start site region 28703 | |
Mir7008 | 3 | 62 | + | miRNA gene | microRNA 7008 | |
Cpgi13047 | 3 | 262 | CpG island | CpG island 13047 | ||
Gm33641 | 3 | 5390 | + | lncRNA gene | predicted gene, 33641 | |
Gm33694 | 3 | 17514 | - | lncRNA gene | predicted gene, 33694 | |
Tssr28704 | 3 | 3 | + | TSS region | transcription start site region 28704 | |
Tssr32910 | 3 | 34 | - | TSS region | transcription start site region 32910 | |
Tssr28705 | 3 | 17 | + | TSS region | transcription start site region 28705 | |
Cpgi13048 | 3 | 2246 | CpG island | CpG island 13048 | ||
Tssr28706 | 3 | 15 | + | TSS region | transcription start site region 28706 | |
Tssr28707 | 3 | 33 | + | TSS region | transcription start site region 28707 | |
Tssr28708 | 3 | 22 | + | TSS region | transcription start site region 28708 | |
Tssr28709 | 3 | 18 | + | TSS region | transcription start site region 28709 | |
Tssr28710 | 3 | 10 | + | TSS region | transcription start site region 28710 | |
Tssr28711 | 3 | 11 | + | TSS region | transcription start site region 28711 | |
Tssr28712 | 3 | 15 | + | TSS region | transcription start site region 28712 | |
Tssr28713 | 3 | 71 | + | TSS region | transcription start site region 28713 | |
Skil | 3 | 27519 | + | protein coding gene | SKI-like | |
Tssr32911 | 3 | 17 | - | TSS region | transcription start site region 32911 | |
Tssr28714 | 3 | 35 | + | TSS region | transcription start site region 28714 | |
Tssr28715 | 3 | 4 | + | TSS region | transcription start site region 28715 | |
Tssr28716 | 3 | 14 | + | TSS region | transcription start site region 28716 | |
Tssr28717 | 3 | 17 | + | TSS region | transcription start site region 28717 | |
Tssr28718 | 3 | 21 | + | TSS region | transcription start site region 28718 | |
Tssr28719 | 3 | 13 | + | TSS region | transcription start site region 28719 | |
Tssr28720 | 3 | 19 | + | TSS region | transcription start site region 28720 | |
Tssr28721 | 3 | 4 | + | TSS region | transcription start site region 28721 | |
Tssr852 | 3 | 7 | + | TSS region | transcription start site region 852 | |
Cpgi13049 | 3 | 679 | CpG island | CpG island 13049 | ||
Tssr28722 | 3 | 15 | + | TSS region | transcription start site region 28722 | |
Tssr28723 | 3 | 16 | + | TSS region | transcription start site region 28723 |