Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 3:28705508-28907424

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31 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc2a2 3 28697903 to 28728361 30458 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 2
1700112D23Rik 3 28702667 to 28781108 78441 - lncRNA gene RIKEN cDNA 1700112D23 gene
D3Mit268 3 28718080 to 28718182 102 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 268
Tssr28655 3 28721506 to 28721547 41 + TSS region transcription start site region 28655
Tssr28656 3 28727966 to 28728016 50 + TSS region transcription start site region 28656
Tssr28657 3 28728829 to 28728841 12 + TSS region transcription start site region 28657
Tssr28658 3 28729087 to 28729098 11 + TSS region transcription start site region 28658
Gm6505 3 28764713 to 28765360 647 - pseudogene predicted pseudogene 6505
Tssr32867 3 28765366 to 28765389 23 - TSS region transcription start site region 32867
Cpgi13028 3 28780828 to 28782022 1194 CpG island CpG island 13028
Tssr32868 3 28781103 to 28781130 27 - TSS region transcription start site region 32868
Eif5a2 3 28781276 to 28798846 17570 + protein coding gene eukaryotic translation initiation factor 5A2
Tssr28659 3 28781305 to 28781344 39 + TSS region transcription start site region 28659
Tssr28660 3 28781345 to 28781374 29 + TSS region transcription start site region 28660
Gm32950 3 28802804 to 28805336 2532 - lncRNA gene predicted gene, 32950
Cpgi13029 3 28805203 to 28806043 840 CpG island CpG island 13029
Tssr32869 3 28805328 to 28805360 32 - TSS region transcription start site region 32869
Tssr28661 3 28805498 to 28805521 23 + TSS region transcription start site region 28661
Rpl22l1 3 28805508 to 28807424 1916 + protein coding gene ribosomal protein L22 like 1
Gm33051 3 28810187 to 28816183 5996 - lncRNA gene predicted gene, 33051
Tssr32870 3 28816243 to 28816254 11 - TSS region transcription start site region 32870
Tssr32871 3 28816264 to 28816275 11 - TSS region transcription start site region 32871
D3Mit369 3 28834409 to 28834519 110 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology-369
Gm37867 3 28852033 to 28854257 2224 - lncRNA gene predicted gene, 37867
Gm37924 3 28879812 to 28883458 3646 + unclassified gene predicted gene, 37924
Gm33102 3 28883279 to 28897214 13935 - lncRNA gene predicted gene, 33102
Tssr28662 3 28892617 to 28892619 2 + TSS region transcription start site region 28662
Gm1527 3 28892619 to 28926725 34106 + protein coding gene predicted gene 1527
Tssr28663 3 28893723 to 28893727 4 + TSS region transcription start site region 28663
Tssr32872 3 28897157 to 28897171 14 - TSS region transcription start site region 32872
Cvht7 3 119100000 to 28900000 -90200000 QTL cranial vault height 7, 16 week