Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:27729635-28239639

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42194 3 27777858 to 27840919 63061 + lncRNA gene predicted gene, 42194
Gm32795 3 27797877 to 27815382 17505 - lncRNA gene predicted gene, 32795
Tssr32860 3 27863456 to 27863471 15 - TSS region transcription start site region 32860
Tmem212 3 27866066 to 27896368 30302 - protein coding gene transmembrane protein 212
Gm26040 3 27868113 to 27868273 160 + snoRNA gene predicted gene, 26040
Tssr32861 3 27896347 to 27896356 9 - TSS region transcription start site region 32861
Tssr32862 3 27896360 to 27896390 30 - TSS region transcription start site region 32862
Gm42195 3 27896803 to 27900234 3431 - lncRNA gene predicted gene, 42195
Cpgi13023 3 27938315 to 27939308 993 CpG island CpG island 13023
Tssr28634 3 27938609 to 27938634 25 + TSS region transcription start site region 28634
Tssr28635 3 27938638 to 27938679 41 + TSS region transcription start site region 28635
Pld1 3 27938695 to 28133362 194667 + protein coding gene phospholipase D1
Tssr28636 3 27961811 to 27961816 5 + TSS region transcription start site region 28636
Tssr28637 3 27984145 to 27984200 55 + TSS region transcription start site region 28637
Tssr28638 3 27984272 to 27984290 18 + TSS region transcription start site region 28638
Tssr28639 3 27984635 to 27984639 4 + TSS region transcription start site region 28639
Tssr28640 3 28034668 to 28034672 4 + TSS region transcription start site region 28640
Tssr28641 3 28052642 to 28052643 1 + TSS region transcription start site region 28641
Tssr32863 3 28157162 to 28157165 3 - TSS region transcription start site region 32863
Tssr32864 3 28164744 to 28164748 4 - TSS region transcription start site region 32864
Gm42196 3 28176512 to 28211377 34865 + lincRNA gene predicted gene, 42196
Cpgi13024 3 28226309 to 28226480 171 CpG island CpG island 13024