MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:27317511-27647522

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tnfsf10	3	27317077 to 27339665	22588	+	protein coding gene	tumor necrosis factor (ligand) superfamily, member 10
Cpgi13021	3	27371143 to 27372660	1517		CpG island	CpG island 13021
Ghsr	3	27371351 to 27378010	6659	+	protein coding gene	growth hormone secretagogue receptor
C430049A07Rik	3	27415105 to 27416151	1046		unclassified gene	RIKEN cDNA C430049A07 gene
Fndc3b	3	27416162 to 27711307	295145	-	protein coding gene	fibronectin type III domain containing 3B
Tssr32849	3	27439076 to 27439084	8	-	TSS region	transcription start site region 32849
Gm42193	3	27441655 to 27444111	2456	+	lncRNA gene	predicted gene, 42193
Gm32738	3	27482284 to 27484243	1959	+	lncRNA gene	predicted gene, 32738
Tssr28628	3	27482493 to 27482504	11	+	TSS region	transcription start site region 28628
Tssr28629	3	27482511 to 27482522	11	+	TSS region	transcription start site region 28629
Tssr28630	3	27482528 to 27482533	5	+	TSS region	transcription start site region 28630
D3Ertd452e	3	27504693 to 27504919	226		DNA segment	DNA segment, Chr 3, ERATO Doi 452, expressed
Gm43344	3	27546641 to 27547869	1228	+	unclassified gene	predicted gene 43344
Tssr32850	3	27556153 to 27556168	15	-	TSS region	transcription start site region 32850
Tssr28631	3	27557396 to 27557410	14	+	TSS region	transcription start site region 28631
Mir3092	3	27584900 to 27584995	95	-	miRNA gene	microRNA 3092
Tssr32851	3	27605702 to 27605717	15	-	TSS region	transcription start site region 32851
Tssr28632	3	27617334 to 27617368	34	+	TSS region	transcription start site region 28632