Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:2586368-4506795

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28002 3 3004130 to 3004229 99 - miRNA gene predicted gene, 28002
Gm27460 3 3027658 to 3027757 99 - miRNA gene predicted gene, 27460
n-TKctt1 3 3123740 to 3123812 72 + tRNA gene nuclear encoded tRNA lysine 1 (anticodon CTT)
n-TKctt9 3 3149493 to 3149565 72 + tRNA gene nuclear encoded tRNA lysine 9 (anticodon CTT)
Tssr28246 3 3187924 to 3187937 13 + TSS region transcription start site region 28246
Tssr28247 3 3187992 to 3187997 5 + TSS region transcription start site region 28247
Tssr28248 3 3188016 to 3188048 32 + TSS region transcription start site region 28248
Gm37338 3 3188033 to 3188159 126 + unclassified gene predicted gene, 37338
Tssr28249 3 3188057 to 3188066 9 + TSS region transcription start site region 28249
Tssr28250 3 3188078 to 3188087 9 + TSS region transcription start site region 28250
Tssr28251 3 3188100 to 3188105 5 + TSS region transcription start site region 28251
Tssr28252 3 3188112 to 3188117 5 + TSS region transcription start site region 28252
Tssr28253 3 3188124 to 3188132 8 + TSS region transcription start site region 28253
Gm8747 3 3266275 to 3266905 630 - pseudogene predicted gene 8747
Cpgi12944 3 3298173 to 3298392 219 CpG island CpG island 12944
Tssr28254 3 3298329 to 3298331 2 + TSS region transcription start site region 28254
Cpgi12945 3 3309046 to 3309301 255 CpG island CpG island 12945
Tssr28255 3 3508005 to 3508021 16 + TSS region transcription start site region 28255
Tssr28256 3 3508024 to 3508069 45 + TSS region transcription start site region 28256
Hnf4g 3 3508030 to 3658052 150022 + protein coding gene hepatocyte nuclear factor 4, gamma
Cpgi12946 3 3508210 to 3508442 232 CpG island CpG island 12946
Tssr28257 3 3512957 to 3512961 4 + TSS region transcription start site region 28257
Gm37000 3 3546368 to 3546795 427 + pseudogene predicted gene, 37000
Gm23237 3 3555465 to 3555556 91 + miRNA gene predicted gene, 23237
Tssr28258 3 3556493 to 3556503 10 + TSS region transcription start site region 28258
Tssr28259 3 3634145 to 3634161 16 + TSS region transcription start site region 28259
Tssr28260 3 3657068 to 3657079 11 + TSS region transcription start site region 28260
Tssr28261 3 3657181 to 3657184 3 + TSS region transcription start site region 28261
Rps24-ps2 3 3791898 to 3792292 394 + pseudogene ribosomal protein S24, pseudogene 2
Gm2071 3 3829284 to 3830057 773 + pseudogene predicted gene 2071
Gm2077 3 3939144 to 3939462 318 + pseudogene predicted gene 2077
Tssr28262 3 4093865 to 4093874 9 + TSS region transcription start site region 28262
Gm8775 3 4211718 to 4213044 1326 + pseudogene predicted gene 8775
Gm23976 3 4305193 to 4305293 100 - miRNA gene predicted gene, 23976
n-R5s194 3 4338998 to 4339116 118 + rRNA gene nuclear encoded rRNA 5S 194
Gm34023 3 4371808 to 4372024 216 + pseudogene predicted gene, 34023
Gm38131 3 4393870 to 4394299 429 - pseudogene predicted gene, 38131
Gm37029 3 4504831 to 4505069 238 + pseudogene predicted gene, 37029