Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:24319068-25969261

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Naaladl2 3 23798103 to 25144144 1346041 - protein coding gene N-acetylated alpha-linked acidic dipeptidase-like 2
Gm7536 3 24333068 to 24333511 443 + pseudogene predicted gene 7536
D3Mit204 3 24336876 to 24337062 186 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 204
Tssr28594 3 24356781 to 24356789 8 + TSS region transcription start site region 28594
2900080J11Rik 3 24486711 to 24487487 776 unclassified gene RIKEN cDNA 2900080J11 gene
Tssr32762 3 24547112 to 24547116 4 - TSS region transcription start site region 32762
Gm24704 3 24562074 to 24562180 106 + snRNA gene predicted gene, 24704
Cfq8 3 24714068 to 31277954 6563886 QTL conditioned fear QTL 8
Gm24062 3 24718716 to 24718981 265 + unclassified non-coding RNA gene predicted gene, 24062
Tssr32763 3 24760324 to 24760328 4 - TSS region transcription start site region 32763
Tssr32764 3 24783561 to 24783607 46 - TSS region transcription start site region 32764
Tssr32765 3 24783608 to 24783621 13 - TSS region transcription start site region 32765
D3Mit238 3 24857212 to 24857360 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 238
Tssr32766 3 24858197 to 24858209 12 - TSS region transcription start site region 32766
Tssr32767 3 24858225 to 24858236 11 - TSS region transcription start site region 32767
Tssr32768 3 24955144 to 24955146 2 - TSS region transcription start site region 32768
Gm42774 3 25007423 to 25007705 282 - pseudogene predicted gene 42774
Cpgi13013 3 25143432 to 25144676 1244 CpG island CpG island 13013
Gm37136 3 25144068 to 25144261 193 + unclassified gene predicted gene, 37136
Tssr32769 3 25144182 to 25144248 66 - TSS region transcription start site region 32769
Tssr32770 3 25144249 to 25144270 21 - TSS region transcription start site region 32770
Tssr32771 3 25144278 to 25144330 52 - TSS region transcription start site region 32771
Gm38002 3 25184800 to 25184979 179 - pseudogene predicted gene, 38002
Gm10259 3 25211016 to 25212605 1589 - pseudogene predicted pseudogene 10259
Tssr28595 3 25330908 to 25330911 3 + TSS region transcription start site region 28595
Tssr32772 3 25431719 to 25431723 4 - TSS region transcription start site region 32772
Nlgn1 3 25431841 to 26332862 901021 - protein coding gene neuroligin 1
Tssr32773 3 25536794 to 25536795 1 - TSS region transcription start site region 32773
Gm24250 3 25546020 to 25546154 134 + rRNA gene predicted gene, 24250
Tssr32774 3 25590390 to 25590398 8 - TSS region transcription start site region 32774
Tssr32775 3 25599069 to 25599073 4 - TSS region transcription start site region 32775
3110039C02Rik 3 25649562 to 25650767 1205 unclassified gene RIKEN cDNA 3110039C02 gene
Tssr32776 3 25661905 to 25661921 16 - TSS region transcription start site region 32776
Tssr32777 3 25672653 to 25672658 5 - TSS region transcription start site region 32777
Tssr32778 3 25685334 to 25685355 21 - TSS region transcription start site region 32778
Gm37573 3 25695195 to 25700303 5108 - sense intronic lncRNA gene predicted gene, 37573
Tssr32779 3 25697962 to 25697987 25 - TSS region transcription start site region 32779
Tssr32780 3 25698015 to 25698036 21 - TSS region transcription start site region 32780
Tssr32781 3 25698131 to 25698139 8 - TSS region transcription start site region 32781
Tssr32782 3 25700227 to 25700250 23 - TSS region transcription start site region 32782
Tssr32783 3 25705065 to 25705073 8 - TSS region transcription start site region 32783
Tssr32784 3 25712390 to 25712402 12 - TSS region transcription start site region 32784
Tssr28596 3 25731182 to 25731216 34 + TSS region transcription start site region 28596
Gm6197 3 25731243 to 25731696 453 + pseudogene predicted gene 6197
Tssr32785 3 25743248 to 25743251 3 - TSS region transcription start site region 32785
Tssr32786 3 25749074 to 25749076 2 - TSS region transcription start site region 32786
Tssr32787 3 25790397 to 25790409 12 - TSS region transcription start site region 32787
Tssr32788 3 25790594 to 25790638 44 - TSS region transcription start site region 32788
Tssr32789 3 25818838 to 25818842 4 - TSS region transcription start site region 32789
Tssr32790 3 25824371 to 25824374 3 - TSS region transcription start site region 32790
Tssr32791 3 25832966 to 25832977 11 - TSS region transcription start site region 32791
Tssr32792 3 25833031 to 25833042 11 - TSS region transcription start site region 32792
Tssr32793 3 25835298 to 25835302 4 - TSS region transcription start site region 32793
Tssr32794 3 25838448 to 25838463 15 - TSS region transcription start site region 32794
Tssr32795 3 25838531 to 25838547 16 - TSS region transcription start site region 32795
Tssr32796 3 25840878 to 25840882 4 - TSS region transcription start site region 32796
Tssr32797 3 25847284 to 25847297 13 - TSS region transcription start site region 32797
Tssr32798 3 25847331 to 25847346 15 - TSS region transcription start site region 32798
Tssr32799 3 25847361 to 25847370 9 - TSS region transcription start site region 32799
Tssr32800 3 25847428 to 25847440 12 - TSS region transcription start site region 32800
Tssr32801 3 25857403 to 25857407 4 - TSS region transcription start site region 32801
A830010M09Rik 3 25865654 to 25867515 1861 unclassified gene RIKEN cDNA A830010M09 gene
Tssr32802 3 25868706 to 25868754 48 - TSS region transcription start site region 32802
Tssr32803 3 25869832 to 25869846 14 - TSS region transcription start site region 32803
Tssr32804 3 25872603 to 25872613 10 - TSS region transcription start site region 32804
Tssr32805 3 25893543 to 25893554 11 - TSS region transcription start site region 32805
Tssr32806 3 25936740 to 25936744 4 - TSS region transcription start site region 32806