Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:23748103-25194144

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Naaladl2	3	23798103 to 25144144	1346041	-	protein coding gene	N-acetylated alpha-linked acidic dipeptidase-like 2
Gm18824	3	23930963 to 23931998	1035	+	pseudogene	predicted gene, 18824
Tssr32760	3	23939452 to 23939465	13	-	TSS region	transcription start site region 32760
Gm42191	3	23940024 to 23945930	5906	+	lncRNA gene	predicted gene, 42191
Tssr32761	3	24138128 to 24138129	1	-	TSS region	transcription start site region 32761
n-TLcag1	3	24163025 to 24163107	82	-	tRNA gene	nuclear encoded tRNA leucine 1 (anticodon CAG)
Del(3)1Lt	3	24170854 to 24282022	111168		cytogenetic marker	deletion, Chr 3, Edward H Leiter 1
Gm7536	3	24333068 to 24333511	443	+	pseudogene	predicted gene 7536
D3Mit204	3	24336876 to 24337062	186		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 204
Tssr28594	3	24356781 to 24356789	8	+	TSS region	transcription start site region 28594
2900080J11Rik	3	24486711 to 24487487	776		unclassified gene	RIKEN cDNA 2900080J11 gene
Tssr32762	3	24547112 to 24547116	4	-	TSS region	transcription start site region 32762
Gm24704	3	24562074 to 24562180	106	+	snRNA gene	predicted gene, 24704
Cfq8	3	24714068 to 31277954	6563886		QTL	conditioned fear QTL 8
Gm24062	3	24718716 to 24718981	265	+	unclassified non-coding RNA gene	predicted gene, 24062
Tssr32763	3	24760324 to 24760328	4	-	TSS region	transcription start site region 32763
Tssr32764	3	24783561 to 24783607	46	-	TSS region	transcription start site region 32764
Tssr32765	3	24783608 to 24783621	13	-	TSS region	transcription start site region 32765
D3Mit238	3	24857212 to 24857360	148		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 238
Tssr32766	3	24858197 to 24858209	12	-	TSS region	transcription start site region 32766
Tssr32767	3	24858225 to 24858236	11	-	TSS region	transcription start site region 32767
Tssr32768	3	24955144 to 24955146	2	-	TSS region	transcription start site region 32768
Gm42774	3	25007423 to 25007705	282	-	pseudogene	predicted gene 42774
Cpgi13013	3	25143432 to 25144676	1244		CpG island	CpG island 13013
Gm37136	3	25144068 to 25144261	193	+	unclassified gene	predicted gene, 37136
Tssr32769	3	25144182 to 25144248	66	-	TSS region	transcription start site region 32769
Tssr32770	3	25144249 to 25144270	21	-	TSS region	transcription start site region 32770
Tssr32771	3	25144278 to 25144330	52	-	TSS region	transcription start site region 32771
Gm38002	3	25184800 to 25184979	179	-	pseudogene	predicted gene, 38002