Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:21888292-22088312

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31813 3 21864168 to 21964346 100178 - lncRNA gene predicted gene, 31813
Tssr32751 3 21936036 to 21936044 8 - TSS region transcription start site region 32751
Cpgi13011 3 21936057 to 21936303 246 CpG island CpG island 13011
D3Mit176 3 21944274 to 21944417 143 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 176
Tssr28574 3 21953183 to 21953192 9 + TSS region transcription start site region 28574
Tssr28575 3 21955081 to 21955088 7 + TSS region transcription start site region 28575
Tssr32752 3 21958628 to 21958642 14 - TSS region transcription start site region 32752
Tssr32753 3 21958743 to 21958762 19 - TSS region transcription start site region 32753
Tssr28576 3 21962715 to 21962761 46 + TSS region transcription start site region 28576
Tssr32754 3 21987816 to 21987837 21 - TSS region transcription start site region 32754
Tssr32755 3 21988257 to 21988279 22 - TSS region transcription start site region 32755
Tssr32756 3 21988292 to 21988312 20 - TSS region transcription start site region 32756
Gm43674 3 21997678 to 21998468 790 - lincRNA gene predicted gene 43674
Gm43671 3 22021197 to 22021629 432 + pseudogene predicted gene 43671
Tssr842 3 22073326 to 22073328 2 + TSS region transcription start site region 842
Gm43672 3 22074412 to 22076142 1730 - lincRNA gene predicted gene 43672
Cpgi13012 3 22075593 to 22077500 1907 CpG island CpG island 13012
Tssr32757 3 22076073 to 22076104 31 - TSS region transcription start site region 32757
Tssr32758 3 22076138 to 22076207 69 - TSS region transcription start site region 32758
Tssr28577 3 22076644 to 22076681 37 + TSS region transcription start site region 28577
Tbl1xr1 3 22076652 to 22216594 139942 + protein coding gene transducin (beta)-like 1X-linked receptor 1
Tssr28578 3 22076725 to 22076797 72 + TSS region transcription start site region 28578
Tssr28579 3 22076830 to 22076895 65 + TSS region transcription start site region 28579
Tssr32759 3 22077478 to 22077499 21 - TSS region transcription start site region 32759
Tssr28580 3 22077550 to 22077554 4 + TSS region transcription start site region 28580
Tssr28581 3 22078766 to 22078770 4 + TSS region transcription start site region 28581
Gm5842 3 22080494 to 22081115 621 - pseudogene predicted gene 5842
Tssr28582 3 22081756 to 22081780 24 + TSS region transcription start site region 28582
Tssr28583 3 22087416 to 22087420 4 + TSS region transcription start site region 28583