MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:21427815-21987460

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm31610	3	21421792 to 21489656	67864	-	lncRNA gene	predicted gene, 31610
D3Mit304	3	21471255 to 21471355	100		DNA segment	DNA Segment, Chr 3, Massachusetts Institute of Technology 304
Thypr3	3	21471255 to 21471355	100		QTL	thymocyte proliferative response 3
Tssr32750	3	21489575 to 21489605	30	-	TSS region	transcription start site region 32750
Gm43675	3	21603810 to 21605508	1698	+	pseudogene	predicted gene 43675
Gm17935	3	21648387 to 21649158	771	+	pseudogene	predicted gene, 17935
Gm31693	3	21702815 to 21712460	9645	+	lincRNA gene	predicted gene, 31693
7530428D23Rik	3	21753596 to 21800796	47200	-	lncRNA gene	RIKEN cDNA 7530428D23 gene
Gm31813	3	21864168 to 21964346	100178	-	lncRNA gene	predicted gene, 31813
Tssr32751	3	21936036 to 21936044	8	-	TSS region	transcription start site region 32751
Cpgi13011	3	21936057 to 21936303	246		CpG island	CpG island 13011
D3Mit176	3	21944274 to 21944417	143		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 176
Tssr28574	3	21953183 to 21953192	9	+	TSS region	transcription start site region 28574
Tssr28575	3	21955081 to 21955088	7	+	TSS region	transcription start site region 28575
Tssr32752	3	21958628 to 21958642	14	-	TSS region	transcription start site region 32752
Tssr32753	3	21958743 to 21958762	19	-	TSS region	transcription start site region 32753
Tssr28576	3	21962715 to 21962761	46	+	TSS region	transcription start site region 28576