Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:20463372-22074090

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31466 3 20503098 to 20506208 3110 - lincRNA gene predicted gene, 31466
Tssr32748 3 20506185 to 20506210 25 - TSS region transcription start site region 32748
Tssr32749 3 20506219 to 20506225 6 - TSS region transcription start site region 32749
Gm18491 3 20782470 to 20784063 1593 - pseudogene predicted gene, 18491
Gm38323 3 20787937 to 20788146 209 + pseudogene predicted gene, 38323
Gm18493 3 20804490 to 20806086 1596 + pseudogene predicted gene, 18493
Gm31552 3 20816385 to 20822361 5976 - lncRNA gene predicted gene, 31552
Gm37480 3 20819621 to 20823689 4068 + unclassified gene predicted gene, 37480
Tssr28573 3 20980292 to 20980294 2 + TSS region transcription start site region 28573
Gm7488 3 21049565 to 21050248 683 + pseudogene predicted gene 7488
Gm43160 3 21113583 to 21114003 420 - pseudogene predicted gene 43160
Gm29137 3 21268372 to 21269090 718 - lincRNA gene predicted gene 29137
Gm31610 3 21421792 to 21489656 67864 - lncRNA gene predicted gene, 31610
Thypr3 3 21471255 to 21471355 100 QTL thymocyte proliferative response 3
D3Mit304 3 21471255 to 21471355 100 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 304
Tssr32750 3 21489575 to 21489605 30 - TSS region transcription start site region 32750
Gm43675 3 21603810 to 21605508 1698 + pseudogene predicted gene 43675
Gm17935 3 21648387 to 21649158 771 + pseudogene predicted gene, 17935
Gm31693 3 21702815 to 21712460 9645 + lincRNA gene predicted gene, 31693
7530428D23Rik 3 21753596 to 21800796 47200 - lncRNA gene RIKEN cDNA 7530428D23 gene
Gm31813 3 21864168 to 21964346 100178 - lncRNA gene predicted gene, 31813
Tssr32751 3 21936036 to 21936044 8 - TSS region transcription start site region 32751
Cpgi13011 3 21936057 to 21936303 246 CpG island CpG island 13011
D3Mit176 3 21944274 to 21944417 143 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 176
Tssr28574 3 21953183 to 21953192 9 + TSS region transcription start site region 28574
Tssr28575 3 21955081 to 21955088 7 + TSS region transcription start site region 28575
Tssr32752 3 21958628 to 21958642 14 - TSS region transcription start site region 32752
Tssr32753 3 21958743 to 21958762 19 - TSS region transcription start site region 32753
Tssr28576 3 21962715 to 21962761 46 + TSS region transcription start site region 28576
Tssr32754 3 21987816 to 21987837 21 - TSS region transcription start site region 32754
Tssr32755 3 21988257 to 21988279 22 - TSS region transcription start site region 32755
Tssr32756 3 21988292 to 21988312 20 - TSS region transcription start site region 32756
Gm43674 3 21997678 to 21998468 790 - lincRNA gene predicted gene 43674
Gm43671 3 22021197 to 22021629 432 + pseudogene predicted gene 43671
Tssr842 3 22073326 to 22073328 2 + TSS region transcription start site region 842