Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:20012513-20252516

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hps3 3 19995945 to 20035315 39370 - protein coding gene HPS3, biogenesis of lysosomal organelles complex 2 subunit 1
Cpgi13007 3 20034835 to 20035529 694 CpG island CpG island 13007
Tssr32705 3 20035269 to 20035283 14 - TSS region transcription start site region 32705
Tssr32706 3 20035285 to 20035325 40 - TSS region transcription start site region 32706
D830024F11Rik 3 20056574 to 20058155 1581 unclassified gene RIKEN cDNA D830024F11 gene
Cpgi13008 3 20057507 to 20058182 675 CpG island CpG island 13008
Tssr28557 3 20057802 to 20057857 55 + TSS region transcription start site region 28557
Hltf 3 20057811 to 20118490 60679 + protein coding gene helicase-like transcription factor
Tssr28558 3 20057878 to 20057885 7 + TSS region transcription start site region 28558
Tssr28559 3 20058336 to 20058352 16 + TSS region transcription start site region 28559
Tssr28560 3 20062647 to 20062659 12 + TSS region transcription start site region 28560
Tssr28561 3 20105030 to 20105042 12 + TSS region transcription start site region 28561
Gyg 3 20122084 to 20155266 33182 - protein coding gene glycogenin
Tssr32707 3 20122473 to 20122478 5 - TSS region transcription start site region 32707
Tssr32708 3 20132513 to 20132516 3 - TSS region transcription start site region 32708
Tssr32709 3 20150600 to 20150617 17 - TSS region transcription start site region 32709
Cpgi13009 3 20154408 to 20155273 865 CpG island CpG island 13009
Tssr841 3 20155056 to 20155072 16 - TSS region transcription start site region 841
Tssr32710 3 20155090 to 20155122 32 - TSS region transcription start site region 32710
Tssr28562 3 20198131 to 20198171 40 + TSS region transcription start site region 28562
Cpa3 3 20215620 to 20242181 26561 - protein coding gene carboxypeptidase A3, mast cell
Mir7007 3 20222290 to 20222359 69 - miRNA gene microRNA 7007
Gm31320 3 20222293 to 20229475 7182 + lncRNA gene predicted gene, 31320
Tssr28563 3 20223101 to 20223145 44 + TSS region transcription start site region 28563
Gm7428 3 20223771 to 20224687 916 - pseudogene predicted gene 7428
Tssr32711 3 20242158 to 20242167 9 - TSS region transcription start site region 32711
Tssr32712 3 20242173 to 20242187 14 - TSS region transcription start site region 32712
Tssr32713 3 20242189 to 20242198 9 - TSS region transcription start site region 32713
Cpb1 3 20249479 to 20275733 26254 - protein coding gene carboxypeptidase B1 (tissue)
Tssr32714 3 20249512 to 20249533 21 - TSS region transcription start site region 32714
Tssr32715 3 20249545 to 20249555 10 - TSS region transcription start site region 32715
Tssr32716 3 20249556 to 20249581 25 - TSS region transcription start site region 32716
Tssr28564 3 20249559 to 20249587 28 + TSS region transcription start site region 28564
Tssr32717 3 20249609 to 20249635 26 - TSS region transcription start site region 32717
Tssr32718 3 20249645 to 20249713 68 - TSS region transcription start site region 32718
Tssr32719 3 20249743 to 20249805 62 - TSS region transcription start site region 32719
Tssr32720 3 20249814 to 20249840 26 - TSS region transcription start site region 32720
Tssr28565 3 20251956 to 20251993 37 + TSS region transcription start site region 28565
Tssr32721 3 20251982 to 20252022 40 - TSS region transcription start site region 32721