MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:19681880-19892091

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Trim55	3	19644474 to 19692421	47947	+	protein coding gene	tripartite motif-containing 55
BC002189	3	19685971 to 19686568	597	+	sense intronic lncRNA gene	cDNA sequence BC002189
Tssr28524	3	19687080 to 19687083	3	+	TSS region	transcription start site region 28524
Tssr28525	3	19689811 to 19689823	12	+	TSS region	transcription start site region 28525
Tssr28526	3	19690017 to 19690020	3	+	TSS region	transcription start site region 28526
Tssr28527	3	19691932 to 19691944	12	+	TSS region	transcription start site region 28527
Tssr28528	3	19692015 to 19692026	11	+	TSS region	transcription start site region 28528
Tssr28529	3	19692494 to 19692520	26	+	TSS region	transcription start site region 28529
Crh	3	19693401 to 19695396	1995	-	protein coding gene	corticotropin releasing hormone
Cpgi13005	3	19693973 to 19695160	1187		CpG island	CpG island 13005
Gm42189	3	19694486 to 19707354	12868	+	lncRNA gene	predicted gene, 42189
Tssr32704	3	19695325 to 19695336	11	-	TSS region	transcription start site region 32704
Tssr28530	3	19707417 to 19707418	1	+	TSS region	transcription start site region 28530
Gm18864	3	19708270 to 19709320	1050	-	pseudogene	predicted gene, 18864
Gm7442	3	19768873 to 19769255	382	+	pseudogene	predicted gene 7442
D3Mit165	3	19786873 to 19787067	194		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 165
D3Mit236	3	19786880 to 19787091	211		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 236
Gm2148	3	19880872 to 19881746	874	-	pseudogene	predicted gene 2148