Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:15977879-17217880

Filter by:
30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5150 3 15946871 to 16006371 59500 - protein coding gene predicted gene 5150
Tssr32658 3 16006328 to 16006335 7 - TSS region transcription start site region 32658
Tssr32659 3 16006344 to 16006361 17 - TSS region transcription start site region 32659
Tssr32660 3 16006381 to 16006400 19 - TSS region transcription start site region 32660
Gm24694 3 16013818 to 16013927 109 + miRNA gene predicted gene, 24694
Gm37836 3 16078150 to 16078324 174 - pseudogene predicted gene, 37836
Tssr28472 3 16099867 to 16099875 8 + TSS region transcription start site region 28472
Gm25863 3 16115615 to 16115943 328 - ribozyme gene predicted gene, 25863
Cpgi12993 3 16182881 to 16183923 1042 CpG island CpG island 12993
Tssr28473 3 16183177 to 16183206 29 + TSS region transcription start site region 28473
Tssr28474 3 16183208 to 16183280 72 + TSS region transcription start site region 28474
Ythdf3 3 16183212 to 16217037 33825 + protein coding gene YTH N6-methyladenosine RNA binding protein 3
Tssr28475 3 16183297 to 16183308 11 + TSS region transcription start site region 28475
Tssr833 3 16183613 to 16183618 5 - TSS region transcription start site region 833
Tssr32661 3 16183642 to 16183687 45 - TSS region transcription start site region 32661
Tssr32662 3 16183833 to 16183844 11 - TSS region transcription start site region 32662
Tssr28476 3 16183864 to 16183877 13 + TSS region transcription start site region 28476
Tssr28477 3 16196516 to 16196535 19 + TSS region transcription start site region 28477
Tssr28478 3 16214691 to 16214705 14 + TSS region transcription start site region 28478
Tssr32663 3 16257253 to 16257254 1 - TSS region transcription start site region 32663
Tssr834 3 16597879 to 16597880 1 + TSS region transcription start site region 834
Tssr28479 3 16792797 to 16792800 3 + TSS region transcription start site region 28479
Gm30223 3 16817078 to 16847955 30877 + lncRNA gene predicted gene, 30223
Gm26485 3 16823249 to 16823312 63 - snRNA gene predicted gene, 26485
Gm42184 3 16862931 to 16902974 40043 + lncRNA gene predicted gene, 42184
Gm42185 3 17002671 to 17069484 66813 - lncRNA gene predicted gene, 42185
D3Mit353 3 17068890 to 17068983 93 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 353
Gm42186 3 17117133 to 17139762 22629 - lncRNA gene predicted gene, 42186
D3Mit324 3 17141986 to 17142145 159 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 324
Tcq12 3 130370000 to 16450000 -113920000 QTL total cholesterol QTL 12