Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:158690477-160300488

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm3092 3 158808682 to 158809728 1046 + pseudogene predicted gene 3092
Tssr32512 3 158897607 to 158897610 3 + TSS region transcription start site region 32512
Tssr1107 3 158949715 to 158949741 26 + TSS region transcription start site region 1107
Tssr32513 3 158960375 to 158960377 2 + TSS region transcription start site region 32513
Gm9423 3 158960446 to 158961442 996 + pseudogene predicted gene 9423
Gm20752 3 159076364 to 159308080 231716 + lincRNA gene predicted gene, 20752
Gm9424 3 159488347 to 159490476 2129 - pseudogene predicted gene 9424
Gm40187 3 159490995 to 159495390 4395 - lncRNA gene predicted gene, 40187
Gm43655 3 159491418 to 159491639 221 + pseudogene predicted gene 43655
Cpgi13982 3 159495236 to 159495607 371 CpG island CpG island 13982
Tssr32514 3 159495408 to 159495438 30 + TSS region transcription start site region 32514
Depdc1a 3 159495433 to 159529955 34522 + protein coding gene DEP domain containing 1a
Tssr1108 3 159495440 to 159495454 14 + TSS region transcription start site region 1108
Tssr1109 3 159495455 to 159495471 16 + TSS region transcription start site region 1109
Tssr1110 3 159495477 to 159495488 11 + TSS region transcription start site region 1110
Tssr32515 3 159528826 to 159528830 4 + TSS region transcription start site region 32515
Rpe65 3 159599175 to 159625321 26146 + protein coding gene retinal pigment epithelium 65
Tssr32516 3 159599177 to 159599191 14 + TSS region transcription start site region 32516
Cpgi13983 3 159839624 to 159839860 236 CpG island CpG island 13983
Tssr32517 3 159839690 to 159839717 27 + TSS region transcription start site region 32517
Wls 3 159839695 to 159938670 98975 + protein coding gene wntless WNT ligand secretion mediator
Tssr32518 3 159839729 to 159839745 16 + TSS region transcription start site region 32518
Tssr1111 3 159839765 to 159839791 26 + TSS region transcription start site region 1111
Tssr32519 3 159873075 to 159873096 21 + TSS region transcription start site region 32519
Gm43307 3 159875846 to 159878216 2370 + unclassified gene predicted gene 43307
Gm19149 3 159882430 to 159883055 625 + pseudogene predicted gene, 19149
Gm17843 3 159891471 to 159892240 769 - pseudogene predicted gene, 17843
Gm23941 3 159916255 to 159916361 106 - snRNA gene predicted gene, 23941
Tssr32520 3 159927877 to 159927880 3 + TSS region transcription start site region 32520