Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:158008923-159048938

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Srsf11 3 158010493 to 158036647 26154 - protein coding gene serine/arginine-rich splicing factor 11
Tssr36297 3 158016346 to 158016359 13 - TSS region transcription start site region 36297
Tssr1106 3 158016368 to 158016383 15 - TSS region transcription start site region 1106
Tssr36298 3 158016419 to 158016435 16 - TSS region transcription start site region 36298
Tssr36299 3 158021400 to 158021430 30 - TSS region transcription start site region 36299
Tssr36300 3 158024005 to 158024024 19 - TSS region transcription start site region 36300
Tssr36301 3 158024685 to 158024695 10 - TSS region transcription start site region 36301
Tssr36302 3 158029239 to 158029244 5 - TSS region transcription start site region 36302
Cpgi13979 3 158031291 to 158032017 726 CpG island CpG island 13979
Tssr36303 3 158031648 to 158031691 43 - TSS region transcription start site region 36303
Tssr36304 3 158031705 to 158031774 69 - TSS region transcription start site region 36304
Gm43362 3 158033940 to 158036409 2469 - unclassified gene predicted gene 43362
Cpgi13980 3 158036162 to 158037096 934 CpG island CpG island 13980
Tssr36305 3 158036545 to 158036565 20 - TSS region transcription start site region 36305
Tssr36306 3 158036566 to 158036629 63 - TSS region transcription start site region 36306
Tssr36307 3 158036630 to 158036647 17 - TSS region transcription start site region 36307
Lrrc40 3 158036682 to 158067090 30408 + protein coding gene leucine rich repeat containing 40
Tssr32510 3 158036694 to 158036728 34 + TSS region transcription start site region 32510
Tssr32511 3 158038346 to 158038351 5 + TSS region transcription start site region 32511
B230334C09Rik 3 158067186 to 158076112 8926 - antisense lncRNA gene RIKEN cDNA B230334C09 gene
Lrrc7 3 158082891 to 158562221 479330 - protein coding gene leucine rich repeat containing 7
Tssr36308 3 158171801 to 158171804 3 - TSS region transcription start site region 36308
Gm42968 3 158180236 to 158181607 1371 + unclassified gene predicted gene 42968
Gm43485 3 158206869 to 158208578 1709 + unclassified gene predicted gene 43485
Tssr36309 3 158282205 to 158282209 4 - TSS region transcription start site region 36309
Gm43486 3 158294414 to 158298752 4338 + unclassified gene predicted gene 43486
Gm43487 3 158488991 to 158490021 1030 + unclassified gene predicted gene 43487
Tssr36310 3 158528923 to 158528938 15 - TSS region transcription start site region 36310
Tssr36311 3 158543348 to 158543375 27 - TSS region transcription start site region 36311
Cpgi13981 3 158560966 to 158562536 1570 CpG island CpG island 13981
Tssr36312 3 158561334 to 158561347 13 - TSS region transcription start site region 36312
Tssr36313 3 158561358 to 158561422 64 - TSS region transcription start site region 36313
Tssr36314 3 158561541 to 158561550 9 - TSS region transcription start site region 36314
Tssr36315 3 158561583 to 158561592 9 - TSS region transcription start site region 36315
Tssr36316 3 158561739 to 158561798 59 - TSS region transcription start site region 36316
Tssr36317 3 158562199 to 158562290 91 - TSS region transcription start site region 36317
Gm3092 3 158808682 to 158809728 1046 + pseudogene predicted gene 3092
Tssr32512 3 158897607 to 158897610 3 + TSS region transcription start site region 32512
Tssr1107 3 158949715 to 158949741 26 + TSS region transcription start site region 1107
Tssr32513 3 158960375 to 158960377 2 + TSS region transcription start site region 32513
Gm9423 3 158960446 to 158961442 996 + pseudogene predicted gene 9423