Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 3:157794248-158025077

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33 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5550 3 157816720 to 157817795 1075 - pseudogene predicted gene 5550
Gm6520 3 157888465 to 157888874 409 - pseudogene predicted gene 6520
Tssr36291 3 157888921 to 157888928 7 - TSS region transcription start site region 36291
Cth 3 157894248 to 157925077 30829 - protein coding gene cystathionase (cystathionine gamma-lyase)
Gm43314 3 157894961 to 157897191 2230 - unclassified gene predicted gene 43314
Tssr36292 3 157900422 to 157900430 8 - TSS region transcription start site region 36292
Tssr36293 3 157906271 to 157906303 32 - TSS region transcription start site region 36293
Tssr36294 3 157909596 to 157909607 11 - TSS region transcription start site region 36294
Cpgi13977 3 157924766 to 157925425 659 CpG island CpG island 13977
Tssr36295 3 157924859 to 157924877 18 - TSS region transcription start site region 36295
Tssr36296 3 157925056 to 157925070 14 - TSS region transcription start site region 36296
1810013D15Rik 3 157925220 to 157938355 13135 + lncRNA gene RIKEN cDNA 1810013D15 gene
Ankrd13c 3 157946779 to 158006837 60058 + protein coding gene ankyrin repeat domain 13c
Cpgi13978 3 157946834 to 157948325 1491 CpG island CpG island 13978
Tssr32499 3 157946954 to 157946993 39 + TSS region transcription start site region 32499
Tssr32500 3 157946995 to 157947041 46 + TSS region transcription start site region 32500
Tssr32501 3 157947047 to 157947066 19 + TSS region transcription start site region 32501
Tssr32502 3 157947213 to 157947244 31 + TSS region transcription start site region 32502
Tssr32503 3 157947245 to 157947260 15 + TSS region transcription start site region 32503
Tssr32504 3 157947495 to 157947510 15 + TSS region transcription start site region 32504
Gm42611 3 157980248 to 157983654 3406 + unclassified gene predicted gene 42611
Tssr32505 3 157993605 to 157993620 15 + TSS region transcription start site region 32505
Tssr32506 3 157993626 to 157993652 26 + TSS region transcription start site region 32506
Tssr32507 3 157993658 to 157993669 11 + TSS region transcription start site region 32507
Tssr32508 3 157993718 to 157993731 13 + TSS region transcription start site region 32508
Tssr32509 3 158006633 to 158006637 4 + TSS region transcription start site region 32509
Srsf11 3 158010493 to 158036647 26154 - protein coding gene serine and arginine-rich splicing factor 11
Tssr36297 3 158016346 to 158016359 13 - TSS region transcription start site region 36297
Tssr1106 3 158016368 to 158016383 15 - TSS region transcription start site region 1106
Tssr36298 3 158016419 to 158016435 16 - TSS region transcription start site region 36298
Tssr36299 3 158021400 to 158021430 30 - TSS region transcription start site region 36299
Tssr36300 3 158024005 to 158024024 19 - TSS region transcription start site region 36300
Tssr36301 3 158024685 to 158024695 10 - TSS region transcription start site region 36301