Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:157172515-157889090

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Negr1 3 156561794 to 157316445 754651 + protein coding gene neuronal growth regulator 1
4930566N20Rik 3 157207662 to 157208860 1198 - unclassified gene RIKEN cDNA 4930566N20 gene
Gm24373 3 157210929 to 157211060 131 + snoRNA gene predicted gene, 24373
Gm23725 3 157237225 to 157237331 106 - snRNA gene predicted gene, 23725
Gm22458 3 157365998 to 157366104 106 + snRNA gene predicted gene, 22458
Gm23379 3 157398262 to 157398368 106 - snRNA gene predicted gene, 23379
Gm5983 3 157410017 to 157410786 769 + pseudogene predicted gene 5983
4930592C13Rik 3 157527515 to 157534090 6575 - antisense lncRNA gene RIKEN cDNA 4930592C13 gene
Cpgi13975 3 157533910 to 157535079 1169 CpG island CpG island 13975
Tssr36289 3 157534062 to 157534075 13 - TSS region transcription start site region 36289
Tssr36290 3 157534077 to 157534094 17 - TSS region transcription start site region 36290
Tssr32489 3 157534103 to 157534160 57 + TSS region transcription start site region 32489
Zranb2 3 157534151 to 157548341 14190 + protein coding gene zinc finger, RAN-binding domain containing 2
Tssr32490 3 157534351 to 157534411 60 + TSS region transcription start site region 32490
Tssr32491 3 157536546 to 157536557 11 + TSS region transcription start site region 32491
Mir186 3 157544279 to 157544349 70 + miRNA gene microRNA 186
Tssr32492 3 157548818 to 157548821 3 + TSS region transcription start site region 32492
Cpgi13976 3 157566625 to 157568179 1554 CpG island CpG island 13976
Ptger3 3 157566816 to 157644758 77942 + protein coding gene prostaglandin E receptor 3 (subtype EP3)
Tssr32493 3 157566854 to 157566863 9 + TSS region transcription start site region 32493
Tssr32494 3 157566868 to 157566891 23 + TSS region transcription start site region 32494
Tssr32495 3 157566916 to 157566921 5 + TSS region transcription start site region 32495
Tssr32496 3 157566940 to 157566952 12 + TSS region transcription start site region 32496
Gm33466 3 157720404 to 157726408 6004 - lincRNA gene predicted gene, 33466
Tssr32497 3 157751811 to 157751845 34 + TSS region transcription start site region 32497
Tssr32498 3 157768099 to 157768104 5 + TSS region transcription start site region 32498
Gm5550 3 157816720 to 157817795 1075 - pseudogene predicted gene 5550
Gm6520 3 157888465 to 157888874 409 - pseudogene predicted gene 6520
Tssr36291 3 157888921 to 157888928 7 - TSS region transcription start site region 36291