Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:15421381-16591400

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sirpb1a 3 15371661 to 15426522 54861 - protein coding gene signal-regulatory protein beta 1A
Sirpb1b 3 15495754 to 15575067 79313 - protein coding gene signal-regulatory protein beta 1B
Gm21014 3 15514358 to 15515637 1279 + pseudogene predicted gene, 21014
Gm37468 3 15547479 to 15548599 1120 + antisense lncRNA gene predicted gene, 37468
Sirpb1c 3 15795147 to 15848530 53383 - protein coding gene signal-regulatory protein beta 1C
Gm6321 3 15891466 to 15892555 1089 - pseudogene predicted gene 6321
Gm7343 3 15941772 to 15942830 1058 - pseudogene predicted gene 7343
Gm5150 3 15946871 to 16006371 59500 - protein coding gene predicted gene 5150
Tssr32658 3 16006328 to 16006335 7 - TSS region transcription start site region 32658
Tssr32659 3 16006344 to 16006361 17 - TSS region transcription start site region 32659
Tssr32660 3 16006381 to 16006400 19 - TSS region transcription start site region 32660
Gm24694 3 16013818 to 16013927 109 + miRNA gene predicted gene, 24694
Gm37836 3 16078150 to 16078324 174 - pseudogene predicted gene, 37836
Tssr28472 3 16099867 to 16099875 8 + TSS region transcription start site region 28472
Gm25863 3 16115615 to 16115943 328 - ribozyme gene predicted gene, 25863
Cpgi12993 3 16182881 to 16183923 1042 CpG island CpG island 12993
Tssr28473 3 16183177 to 16183206 29 + TSS region transcription start site region 28473
Tssr28474 3 16183208 to 16183280 72 + TSS region transcription start site region 28474
Ythdf3 3 16183212 to 16217037 33825 + protein coding gene YTH N6-methyladenosine RNA binding protein 3
Tssr28475 3 16183297 to 16183308 11 + TSS region transcription start site region 28475
Tssr833 3 16183613 to 16183618 5 - TSS region transcription start site region 833
Tssr32661 3 16183642 to 16183687 45 - TSS region transcription start site region 32661
Tssr32662 3 16183833 to 16183844 11 - TSS region transcription start site region 32662
Tssr28476 3 16183864 to 16183877 13 + TSS region transcription start site region 28476
Tssr28477 3 16196516 to 16196535 19 + TSS region transcription start site region 28477
Tssr28478 3 16214691 to 16214705 14 + TSS region transcription start site region 28478
Tssr32663 3 16257253 to 16257254 1 - TSS region transcription start site region 32663
Tcq12 3 130370000 to 16450000 -113920000 QTL total cholesterol QTL 12