Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:153689305-153892087

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
St6galnac3	3	153202509 to 153725133	522624	-	protein coding gene	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
Gm5858	3	153691408 to 153694821	3413	-	pseudogene	predicted gene 5858
Tssr36237	3	153705691 to 153705703	12	-	TSS region	transcription start site region 36237
Tssr36238	3	153705802 to 153705819	17	-	TSS region	transcription start site region 36238
Gm22206	3	153708911 to 153709026	115	+	snoRNA gene	predicted gene, 22206
Tssr36239	3	153721044 to 153721057	13	-	TSS region	transcription start site region 36239
Tssr32435	3	153723905 to 153723913	8	+	TSS region	transcription start site region 32435
Cpgi13961	3	153724605 to 153725498	893		CpG island	CpG island 13961
Tssr36240	3	153725104 to 153725179	75	-	TSS region	transcription start site region 36240
Tssr36241	3	153733909 to 153733929	20	-	TSS region	transcription start site region 36241
Gm43833	3	153749299 to 153749591	292	+	pseudogene	predicted gene 43833
Gm10042	3	153785053 to 153785134	81	+	pseudogene	predicted gene 10042
5730460C07Rik	3	153789305 to 153792087	2782	-	lincRNA gene	RIKEN cDNA 5730460C07 gene
Gm25757	3	153831170 to 153831292	122	+	snoRNA gene	predicted gene, 25757
Tssr32436	3	153844217 to 153844225	8	+	TSS region	transcription start site region 32436
Tssr32437	3	153844235 to 153844270	35	+	TSS region	transcription start site region 32437
Asb17	3	153844247 to 153853615	9368	+	protein coding gene	ankyrin repeat and SOCS box-containing 17
Tssr32438	3	153849865 to 153849893	28	+	TSS region	transcription start site region 32438
Asb17os	3	153850374 to 153852424	2050	-	antisense lncRNA gene	ankyrin repeat and SOCS box-containing 17, opposite strand
Tssr36242	3	153852390 to 153852412	22	-	TSS region	transcription start site region 36242
Tssr36243	3	153852414 to 153852428	14	-	TSS region	transcription start site region 36243
Tssr36244	3	153852430 to 153852447	17	-	TSS region	transcription start site region 36244
Tssr36245	3	153852483 to 153852485	2	-	TSS region	transcription start site region 36245
Msh4	3	153857149 to 153906138	48989	-	protein coding gene	mutS homolog 4
Gm24395	3	153864807 to 153864931	124	+	snoRNA gene	predicted gene, 24395
Tssr36246	3	153866614 to 153866619	5	-	TSS region	transcription start site region 36246