Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:152820433-153111417

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hrtfm8 3 148745409 to 152886674 4141265 QTL heart failure modifier 8
Pigk 3 152714085 to 152842926 128841 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class K
St6galnac5 3 152820709 to 152982207 161498 - protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Tssr36219 3 152845810 to 152845819 9 - TSS region transcription start site region 36219
Cpgi13956 3 152864065 to 152864699 634 CpG island CpG island 13956
Gm16232 3 152876051 to 152876217 166 - pseudogene predicted gene 16232
Tssr32421 3 152884220 to 152884293 73 + TSS region transcription start site region 32421
Tssr32422 3 152884346 to 152884366 20 + TSS region transcription start site region 32422
D3Mit322 3 152886552 to 152886674 122 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 322
Gm46830 3 152906361 to 152920809 14448 + lncRNA gene predicted gene, 46830
Tssr32423 3 152908342 to 152908350 8 + TSS region transcription start site region 32423
Tssr32424 3 152912345 to 152912403 58 + TSS region transcription start site region 32424
Tssr32425 3 152912720 to 152912734 14 + TSS region transcription start site region 32425
Gm16213 3 152920240 to 152921399 1159 + antisense lncRNA gene predicted gene 16213
Tssr32426 3 152921152 to 152921155 3 + TSS region transcription start site region 32426
Tssr32427 3 152928889 to 152928900 11 + TSS region transcription start site region 32427
Tssr32428 3 152930044 to 152930048 4 + TSS region transcription start site region 32428
Gm16231 3 152943313 to 152943944 631 + antisense lncRNA gene predicted gene 16231
2900086E13Rik 3 152965432 to 152966416 984 unclassified gene RIKEN cDNA 2900086E13 gene
Gm42710 3 152965433 to 152966417 984 + unclassified gene predicted gene 42710
Tssr36220 3 152973352 to 152973364 12 - TSS region transcription start site region 36220
Tssr36221 3 152973628 to 152973640 12 - TSS region transcription start site region 36221
Tssr32429 3 152979753 to 152979778 25 + TSS region transcription start site region 32429
Cpgi13957 3 152980900 to 152981747 847 CpG island CpG island 13957
Cpgi13958 3 152982036 to 152982290 254 CpG island CpG island 13958
Tssr36222 3 152982187 to 152982216 29 - TSS region transcription start site region 36222
Tssr36223 3 152982240 to 152982251 11 - TSS region transcription start site region 36223
Gm40182 3 153068902 to 153075214 6312 + lncRNA gene predicted gene, 40182
Tssr32430 3 153078274 to 153078291 17 + TSS region transcription start site region 32430