Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:152614085-152942926

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hrtfm8	3	148745409 to 152886674	4141265		QTL	heart failure modifier 8
Ak5	3	152462815 to 152668360	205545	-	protein coding gene	adenylate kinase 5
AI115009	3	152666913 to 152681432	14519	+	antisense lncRNA gene	expressed sequence AI115009
Cpgi13952	3	152667069 to 152668514	1445		CpG island	CpG island 13952
Tssr36216	3	152667964 to 152667976	12	-	TSS region	transcription start site region 36216
Tssr36217	3	152668033 to 152668102	69	-	TSS region	transcription start site region 36217
Tssr36218	3	152668135 to 152668147	12	-	TSS region	transcription start site region 36218
Cpgi13953	3	152690278 to 152690431	153		CpG island	CpG island 13953
Gm32085	3	152697823 to 152709908	12085	+	lncRNA gene	predicted gene, 32085
Tssr32417	3	152702665 to 152702706	41	+	TSS region	transcription start site region 32417
Cpgi13954	3	152713909 to 152714721	812		CpG island	CpG island 13954
Pigk	3	152714085 to 152842926	128841	+	protein coding gene	phosphatidylinositol glycan anchor biosynthesis, class K
Tssr32418	3	152714094 to 152714137	43	+	TSS region	transcription start site region 32418
D3Dcr22	3	152731073 to 152731183	110		DNA segment	DNA Segment, Chr 3, Derry C. Roopenian 22
D3Mit323	3	152740311 to 152740430	119		DNA segment	DNA Segment, Chr 3, Massachusetts Institute of Technology 323
D3Mit323.1	3	152740454 to 152740570	116		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 323.1
Gm40181	3	152752450 to 152756090	3640	-	lncRNA gene	predicted gene, 40181
Tssr32419	3	152763373 to 152763415	42	+	TSS region	transcription start site region 32419
Cpgi13955	3	152763567 to 152763771	204		CpG island	CpG island 13955
Rpl29-ps1	3	152780774 to 152782061	1287	-	pseudogene	ribosomal protein L29, pseudogene 1
Tssr32420	3	152785438 to 152785457	19	+	TSS region	transcription start site region 32420
St6galnac5	3	152820709 to 152982207	161498	-	protein coding gene	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Tssr36219	3	152845810 to 152845819	9	-	TSS region	transcription start site region 36219
Cpgi13956	3	152864065 to 152864699	634		CpG island	CpG island 13956
Gm16232	3	152876051 to 152876217	166	-	pseudogene	predicted gene 16232
Tssr32421	3	152884220 to 152884293	73	+	TSS region	transcription start site region 32421
Tssr32422	3	152884346 to 152884366	20	+	TSS region	transcription start site region 32422
D3Mit322	3	152886552 to 152886674	122		DNA segment	DNA Segment, Chr 3, Massachusetts Institute of Technology 322
Gm46830	3	152906361 to 152920809	14448	+	lncRNA gene	predicted gene, 46830
Tssr32423	3	152908342 to 152908350	8	+	TSS region	transcription start site region 32423
Tssr32424	3	152912345 to 152912403	58	+	TSS region	transcription start site region 32424
Tssr32425	3	152912720 to 152912734	14	+	TSS region	transcription start site region 32425
Gm16213	3	152920240 to 152921399	1159	+	antisense lncRNA gene	predicted gene 16213
Tssr32426	3	152921152 to 152921155	3	+	TSS region	transcription start site region 32426
Tssr32427	3	152928889 to 152928900	11	+	TSS region	transcription start site region 32427
Tssr32428	3	152930044 to 152930048	4	+	TSS region	transcription start site region 32428