MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:152088839-152170900

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi13938	3	152092503 to 152092834	331		CpG island	CpG island 13938
Gipc2	3	152093839 to 152165900	72061	-	protein coding gene	GIPC PDZ domain containing family, member 2
Gm40179	3	152104061 to 152106918	2857	-	lncRNA gene	predicted gene, 40179
Cpgi13939	3	152105428 to 152105717	289		CpG island	CpG island 13939
Gm31881	3	152106439 to 152107383	944	+	antisense lncRNA gene	predicted gene, 31881
Cpgi13940	3	152106530 to 152107307	777		CpG island	CpG island 13940
Tssr36159	3	152107197 to 152107201	4	-	TSS region	transcription start site region 36159
Tssr36160	3	152108736 to 152108772	36	-	TSS region	transcription start site region 36160
Cpgi13941	3	152110957 to 152111174	217		CpG island	CpG island 13941
Tssr1097	3	152114909 to 152114932	23	-	TSS region	transcription start site region 1097
Tssr1098	3	152120096 to 152120114	18	-	TSS region	transcription start site region 1098
Tssr32394	3	152120310 to 152120320	10	+	TSS region	transcription start site region 32394
Tssr32395	3	152122974 to 152122981	7	+	TSS region	transcription start site region 32395
Tssr1099	3	152147377 to 152147386	9	+	TSS region	transcription start site region 1099
Gm16198	3	152153447 to 152154116	669	+	pseudogene	predicted gene 16198
Cpgi13942	3	152165347 to 152166255	908		CpG island	CpG island 13942
D630002J18Rik	3	152165374 to 152166488	1114	+	protein coding gene	RIKEN cDNA D630002J18 gene
Tssr36161	3	152165879 to 152165966	87	-	TSS region	transcription start site region 36161
Cpgi13943	3	152167180 to 152167442	262		CpG island	CpG island 13943