Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:151957197-152257201

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm2939 3 151959185 to 151959662 477 + pseudogene predicted gene 2939
Gm2860 3 151972802 to 151973508 706 - pseudogene predicted gene 2860
Tssr32393 3 151988440 to 151988447 7 + TSS region transcription start site region 32393
Gm43619 3 151988454 to 151992332 3878 + lincRNA gene predicted gene 43619
Tssr36158 3 152005498 to 152005508 10 - TSS region transcription start site region 36158
Gm9682 3 152071246 to 152071801 555 - pseudogene predicted pseudogene 9682
Cpgi13937 3 152083104 to 152083491 387 CpG island CpG island 13937
Cpgi13938 3 152092503 to 152092834 331 CpG island CpG island 13938
Gipc2 3 152093839 to 152165900 72061 - protein coding gene GIPC PDZ domain containing family, member 2
Gm40179 3 152104061 to 152106918 2857 - lncRNA gene predicted gene, 40179
Cpgi13939 3 152105428 to 152105717 289 CpG island CpG island 13939
Gm31881 3 152106439 to 152107383 944 + antisense lncRNA gene predicted gene, 31881
Cpgi13940 3 152106530 to 152107307 777 CpG island CpG island 13940
Tssr36159 3 152107197 to 152107201 4 - TSS region transcription start site region 36159
Tssr36160 3 152108736 to 152108772 36 - TSS region transcription start site region 36160
Cpgi13941 3 152110957 to 152111174 217 CpG island CpG island 13941
Tssr1097 3 152114909 to 152114932 23 - TSS region transcription start site region 1097
Tssr1098 3 152120096 to 152120114 18 - TSS region transcription start site region 1098
Tssr32394 3 152120310 to 152120320 10 + TSS region transcription start site region 32394
Tssr32395 3 152122974 to 152122981 7 + TSS region transcription start site region 32395
Tssr1099 3 152147377 to 152147386 9 + TSS region transcription start site region 1099
Gm16198 3 152153447 to 152154116 669 + pseudogene predicted gene 16198
Cpgi13942 3 152165347 to 152166255 908 CpG island CpG island 13942
D630002J18Rik 3 152165374 to 152166488 1114 + protein coding gene RIKEN cDNA D630002J18 gene
Tssr36161 3 152165879 to 152165966 87 - TSS region transcription start site region 36161
Cpgi13943 3 152167180 to 152167442 262 CpG island CpG island 13943
Tssr36162 3 152176352 to 152176380 28 - TSS region transcription start site region 36162
Dnajb4 3 152183871 to 152210328 26457 - protein coding gene DnaJ heat shock protein family (Hsp40) member B4
Cpgi13944 3 152193701 to 152193972 271 CpG island CpG island 13944
Tssr36163 3 152193723 to 152193734 11 - TSS region transcription start site region 36163
Tssr36164 3 152193747 to 152193768 21 - TSS region transcription start site region 36164
Tssr36165 3 152193773 to 152193797 24 - TSS region transcription start site region 36165
Tssr36166 3 152193803 to 152193831 28 - TSS region transcription start site region 36166
Tssr36167 3 152193833 to 152193842 9 - TSS region transcription start site region 36167
Gm40180 3 152197571 to 152204579 7008 + lncRNA gene predicted gene, 40180
Cpgi13945 3 152209750 to 152211551 1801 CpG island CpG island 13945
Tssr32396 3 152209899 to 152209928 29 + TSS region transcription start site region 32396
Tssr36168 3 152210017 to 152210028 11 - TSS region transcription start site region 36168
Tssr36169 3 152210032 to 152210123 91 - TSS region transcription start site region 36169
Tssr36170 3 152210267 to 152210320 53 - TSS region transcription start site region 36170
Fubp1 3 152210427 to 152236830 26403 + protein coding gene far upstream element (FUSE) binding protein 1
Tssr32397 3 152210454 to 152210465 11 + TSS region transcription start site region 32397
Tssr32398 3 152210469 to 152210534 65 + TSS region transcription start site region 32398
Tssr32399 3 152214285 to 152214290 5 + TSS region transcription start site region 32399
Tssr32400 3 152215437 to 152215449 12 + TSS region transcription start site region 32400
Tssr32401 3 152226143 to 152226162 19 + TSS region transcription start site region 32401
Tssr32402 3 152231967 to 152231984 17 + TSS region transcription start site region 32402
Tssr32403 3 152234794 to 152234800 6 + TSS region transcription start site region 32403
Nexn 3 152236982 to 152266350 29368 - protein coding gene nexilin
Tssr36171 3 152241048 to 152241050 2 - TSS region transcription start site region 36171
Tssr36172 3 152242805 to 152242819 14 - TSS region transcription start site region 36172
Tssr36173 3 152243852 to 152243861 9 - TSS region transcription start site region 36173
Tssr36174 3 152243876 to 152243898 22 - TSS region transcription start site region 36174
Tssr36175 3 152243975 to 152243987 12 - TSS region transcription start site region 36175
Tssr36176 3 152243991 to 152244004 13 - TSS region transcription start site region 36176
Tssr36177 3 152244007 to 152244033 26 - TSS region transcription start site region 36177
Tssr36178 3 152244071 to 152244078 7 - TSS region transcription start site region 36178
Tssr36179 3 152247108 to 152247152 44 - TSS region transcription start site region 36179
Tssr36180 3 152247186 to 152247197 11 - TSS region transcription start site region 36180
Tssr36181 3 152247210 to 152247219 9 - TSS region transcription start site region 36181
Tssr36182 3 152247225 to 152247236 11 - TSS region transcription start site region 36182
Tssr36183 3 152247253 to 152247266 13 - TSS region transcription start site region 36183
Tssr36184 3 152247956 to 152247970 14 - TSS region transcription start site region 36184
Tssr36185 3 152247972 to 152248001 29 - TSS region transcription start site region 36185
Tssr36186 3 152248080 to 152248091 11 - TSS region transcription start site region 36186
Tssr36187 3 152248257 to 152248274 17 - TSS region transcription start site region 36187
Tssr36188 3 152248325 to 152248343 18 - TSS region transcription start site region 36188
Tssr36189 3 152248351 to 152248374 23 - TSS region transcription start site region 36189
Tssr36190 3 152248429 to 152248435 6 - TSS region transcription start site region 36190
Tssr36191 3 152249678 to 152249724 46 - TSS region transcription start site region 36191
Gm43185 3 152250029 to 152252803 2774 - unclassified gene predicted gene 43185
Tssr36192 3 152250159 to 152250173 14 - TSS region transcription start site region 36192
Tssr36193 3 152252828 to 152252849 21 - TSS region transcription start site region 36193
Tssr1100 3 152252870 to 152252913 43 + TSS region transcription start site region 1100
Tssr36194 3 152252918 to 152252963 45 - TSS region transcription start site region 36194
Tssr36195 3 152253070 to 152253076 6 - TSS region transcription start site region 36195
Tssr36196 3 152253084 to 152253103 19 - TSS region transcription start site region 36196
Tssr36197 3 152253121 to 152253134 13 - TSS region transcription start site region 36197
Tssr32404 3 152253608 to 152253641 33 + TSS region transcription start site region 32404
Tssr36198 3 152253680 to 152253690 10 - TSS region transcription start site region 36198
Tssr36199 3 152253695 to 152253714 19 - TSS region transcription start site region 36199
Tssr36200 3 152253719 to 152253750 31 - TSS region transcription start site region 36200
Tssr36201 3 152253755 to 152253766 11 - TSS region transcription start site region 36201
Tssr36202 3 152253801 to 152253812 11 - TSS region transcription start site region 36202
Tssr36203 3 152255333 to 152255354 21 - TSS region transcription start site region 36203
Tssr36204 3 152255355 to 152255373 18 - TSS region transcription start site region 36204