Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:149376233-151614321

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30382 3 149284418 to 149445301 160883 - lincRNA gene predicted gene, 30382
Tssr1091 3 149423770 to 149423775 5 + TSS region transcription start site region 1091
Lfibq3 3 149426233 to 151564321 2138088 QTL liver fibrosis QTL 3
A630039O03Rik 3 149444227 to 149498001 53774 + lncRNA gene RIKEN cDNA A630039O03 gene
Tssr36100 3 149445186 to 149445244 58 - TSS region transcription start site region 36100
Tssr36101 3 149445253 to 149445265 12 - TSS region transcription start site region 36101
Tssr36102 3 149445267 to 149445278 11 - TSS region transcription start site region 36102
Tssr36103 3 149445351 to 149445369 18 - TSS region transcription start site region 36103
Tssr36104 3 149445376 to 149445417 41 - TSS region transcription start site region 36104
Tssr36105 3 149445453 to 149445495 42 - TSS region transcription start site region 36105
Gm31060 3 149498160 to 149516022 17862 + lncRNA gene predicted gene, 31060
Cpgi13933 3 149519327 to 149519481 154 CpG island CpG island 13933
D3Mit148 3 149522982 to 149523106 124 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 148
D3Dcr20 3 149523550 to 149523659 109 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 20
Gm31121 3 149562882 to 149660394 97512 - lincRNA gene predicted gene, 31121
D3Mit32 3 149748422 to 149748596 174 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 32
Gm31244 3 149907519 to 149938892 31373 + lncRNA gene predicted gene, 31244
Tssr1092 3 149954587 to 149954594 7 + TSS region transcription start site region 1092
Tssr32377 3 150049725 to 150049731 6 + TSS region transcription start site region 32377
Rpsa-ps10 3 150072658 to 150073542 884 - pseudogene ribosomal protein SA, pseudogene 10
Tssr32378 3 150401911 to 150401947 36 + TSS region transcription start site region 32378
Gm40178 3 150401926 to 150408977 7051 + lncRNA gene predicted gene, 40178
Gm6439 3 150515220 to 150516081 861 - pseudogene predicted gene 6439
Cpgi13934 3 150515842 to 150516218 376 CpG island CpG island 13934
Gm43470 3 150588739 to 150612176 23437 + lincRNA gene predicted gene 43470
Tssr32379 3 150588811 to 150588822 11 + TSS region transcription start site region 32379
Loco1 3 150756256 to 150756405 149 QTL locomotor activity 1
D3Mit128 3 150756256 to 150756405 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 128
Mir3963 3 151023792 to 151023862 70 - miRNA gene microRNA 3963
Gm43468 3 151071387 to 151074558 3171 + lincRNA gene predicted gene 43468
Gm43469 3 151092134 to 151096767 4633 - unclassified gene predicted gene 43469
Gm43473 3 151117922 to 151123918 5996 - unclassified gene predicted gene 43473
Tssr164681 3 151198865 to 151198866 1 - TSS region transcription start site region 164681
4930555A03Rik 3 151293853 to 151296307 2454 + lincRNA gene RIKEN cDNA 4930555A03 gene
Tssr32380 3 151294141 to 151294178 37 + TSS region transcription start site region 32380
Tssr32381 3 151294203 to 151294218 15 + TSS region transcription start site region 32381
Tssr32382 3 151294229 to 151294243 14 + TSS region transcription start site region 32382
Tssr1093 3 151294519 to 151294529 10 + TSS region transcription start site region 1093
Tssr1094 3 151294531 to 151294546 15 + TSS region transcription start site region 1094
Gm42949 3 151333349 to 151337638 4289 + lincRNA gene predicted gene 42949
Tssr32383 3 151383668 to 151383674 6 + TSS region transcription start site region 32383
Tssr1095 3 151386373 to 151386380 7 + TSS region transcription start site region 1095
Tssr32384 3 151386392 to 151386401 9 + TSS region transcription start site region 32384
Cpgi13935 3 151437798 to 151438082 284 CpG island CpG island 13935
Adgrl4 3 151437882 to 151545081 107199 + protein coding gene adhesion G protein-coupled receptor L4
Tssr32385 3 151437890 to 151437914 24 + TSS region transcription start site region 32385
Tssr32386 3 151437921 to 151437956 35 + TSS region transcription start site region 32386
Tssr32387 3 151438059 to 151438074 15 + TSS region transcription start site region 32387
Tssr32388 3 151438160 to 151438168 8 + TSS region transcription start site region 32388
Tssr1096 3 151439232 to 151439239 7 + TSS region transcription start site region 1096
Tssr32389 3 151439243 to 151439260 17 + TSS region transcription start site region 32389
Tssr32390 3 151439388 to 151439429 41 + TSS region transcription start site region 32390
Tssr32391 3 151508031 to 151508043 12 + TSS region transcription start site region 32391
Gm24458 3 151608343 to 151608449 106 + snRNA gene predicted gene, 24458