Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:148995271-149425729

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43573 3 148989152 to 149004031 14879 + antisense lncRNA gene predicted gene 43573
Gm30827 3 148996762 to 149011815 15053 + lncRNA gene predicted gene, 30827
Gm43572 3 149005496 to 149007443 1947 + unclassified non-coding RNA gene predicted gene 43572
Gm25127 3 149028932 to 149029038 106 + snRNA gene predicted gene, 25127
Tssr36091 3 149077089 to 149077100 11 - TSS region transcription start site region 36091
Tssr36092 3 149077114 to 149077128 14 - TSS region transcription start site region 36092
Tssr36093 3 149077151 to 149077160 9 - TSS region transcription start site region 36093
Tssr36094 3 149077179 to 149077193 14 - TSS region transcription start site region 36094
Tssr36095 3 149077236 to 149077266 30 - TSS region transcription start site region 36095
Tssr36096 3 149077341 to 149077363 22 - TSS region transcription start site region 36096
Gm30575 3 149082268 to 149096302 14034 + lncRNA gene predicted gene, 30575
Gm42647 3 149210271 to 149210729 458 + pseudogene predicted gene 42647
Tssr36097 3 149219424 to 149219433 9 - TSS region transcription start site region 36097
Gm10287 3 149221687 to 149225745 4058 - lincRNA gene predicted gene 10287
Cpgi13931 3 149225808 to 149225984 176 CpG island CpG island 13931
D3Dcr18 3 149269724 to 149269831 107 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 18
D3Mit293 3 149269724 to 149269826 102 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 293
Gm1653 3 149274737 to 149279980 5243 + lncRNA gene predicted gene 1653
8430415D16Rik 3 149280005 to 149280504 499 unclassified gene RIKEN cDNA 8430415D16 gene
Gm30382 3 149284418 to 149445301 160883 - lincRNA gene predicted gene, 30382
Tssr36098 3 149326765 to 149326768 3 - TSS region transcription start site region 36098
Tssr32375 3 149326993 to 149327026 33 + TSS region transcription start site region 32375
Tssr36099 3 149329706 to 149329711 5 - TSS region transcription start site region 36099
Tssr32376 3 149334839 to 149334869 30 + TSS region transcription start site region 32376
Gm5149 3 149335731 to 149340637 4906 + lincRNA gene predicted gene 5149
D3Dcr19 3 149337264 to 149337359 95 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 19
Gm26468 3 149340903 to 149341008 105 - snRNA gene predicted gene, 26468
Cpgi13932 3 149369392 to 149369728 336 CpG island CpG island 13932
Tssr1091 3 149423770 to 149423775 5 + TSS region transcription start site region 1091