Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:14877479-16218599

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12992 3 14886015 to 14887214 1199 CpG island CpG island 12992
Tssr826 3 14886204 to 14886320 116 + TSS region transcription start site region 826
Car2 3 14886278 to 14900770 14492 + protein coding gene carbonic anhydrase 2
Tssr827 3 14886418 to 14886427 9 + TSS region transcription start site region 827
Tssr828 3 14886434 to 14886483 49 + TSS region transcription start site region 828
Tssr829 3 14886524 to 14886569 45 + TSS region transcription start site region 829
Tssr830 3 14886605 to 14886615 10 + TSS region transcription start site region 830
Tssr831 3 14886626 to 14886648 22 + TSS region transcription start site region 831
Tssr28466 3 14886683 to 14886700 17 + TSS region transcription start site region 28466
Tssr832 3 14886715 to 14886721 6 + TSS region transcription start site region 832
Tssr28467 3 14886815 to 14886859 44 + TSS region transcription start site region 28467
Tssr28468 3 14887388 to 14887416 28 + TSS region transcription start site region 28468
Tssr28469 3 14970278 to 14970285 7 + TSS region transcription start site region 28469
A930001A20Rik 3 14971201 to 15002727 31526 + lincRNA gene RIKEN cDNA A930001A20 gene
Gm7132 3 14973569 to 14974552 983 - pseudogene predicted gene 7132
Tssr32655 3 14993966 to 14993970 4 - TSS region transcription start site region 32655
Tssr28470 3 15000910 to 15000951 41 + TSS region transcription start site region 28470
Gm42000 3 15055968 to 15061831 5863 + lncRNA gene predicted gene, 42000
Tssr28471 3 15056069 to 15056103 34 + TSS region transcription start site region 28471
Gm33819 3 15153012 to 15157285 4273 - lincRNA gene predicted gene, 33819
Gm9733 3 15296551 to 15332302 35751 - protein coding gene predicted gene 9733
Tssr32656 3 15332265 to 15332282 17 - TSS region transcription start site region 32656
Tssr32657 3 15332285 to 15332298 13 - TSS region transcription start site region 32657
Sirpb1a 3 15371661 to 15426522 54861 - protein coding gene signal-regulatory protein beta 1A
Sirpb1b 3 15495754 to 15575067 79313 - protein coding gene signal-regulatory protein beta 1B
Gm21014 3 15514358 to 15515637 1279 + pseudogene predicted gene, 21014
Gm37468 3 15547479 to 15548599 1120 + antisense lncRNA gene predicted gene, 37468
Sirpb1c 3 15795147 to 15848530 53383 - protein coding gene signal-regulatory protein beta 1C
Gm6321 3 15891466 to 15892555 1089 - pseudogene predicted gene 6321
Gm7343 3 15941772 to 15942830 1058 - pseudogene predicted gene 7343
Gm5150 3 15946871 to 16006371 59500 - protein coding gene predicted gene 5150
Tssr32658 3 16006328 to 16006335 7 - TSS region transcription start site region 32658
Tssr32659 3 16006344 to 16006361 17 - TSS region transcription start site region 32659
Tssr32660 3 16006381 to 16006400 19 - TSS region transcription start site region 32660
Gm24694 3 16013818 to 16013927 109 + miRNA gene predicted gene, 24694
Gm37836 3 16078150 to 16078324 174 - pseudogene predicted gene, 37836
Tssr28472 3 16099867 to 16099875 8 + TSS region transcription start site region 28472
Gm25863 3 16115615 to 16115943 328 - ribozyme gene predicted gene, 25863
Cpgi12993 3 16182881 to 16183923 1042 CpG island CpG island 12993
Tssr28473 3 16183177 to 16183206 29 + TSS region transcription start site region 28473
Tssr28474 3 16183208 to 16183280 72 + TSS region transcription start site region 28474
Ythdf3 3 16183212 to 16217037 33825 + protein coding gene YTH N6-methyladenosine RNA binding protein 3
Tssr28475 3 16183297 to 16183308 11 + TSS region transcription start site region 28475
Tssr833 3 16183613 to 16183618 5 - TSS region transcription start site region 833
Tssr32661 3 16183642 to 16183687 45 - TSS region transcription start site region 32661
Tssr32662 3 16183833 to 16183844 11 - TSS region transcription start site region 32662
Tssr28476 3 16183864 to 16183877 13 + TSS region transcription start site region 28476
Tssr28477 3 16196516 to 16196535 19 + TSS region transcription start site region 28477
Tssr28478 3 16214691 to 16214705 14 + TSS region transcription start site region 28478