Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:14770754-16300067

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105 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Car1 3 14766214 to 14808365 42151 - protein coding gene carbonic anhydrase 1
Tssr28427 3 14776219 to 14776238 19 + TSS region transcription start site region 28427
Tssr32645 3 14776254 to 14776276 22 - TSS region transcription start site region 32645
Tssr32646 3 14778452 to 14778466 14 - TSS region transcription start site region 32646
Gm16399 3 14802356 to 14802574 218 - pseudogene predicted pseudogene 16399
Tssr32647 3 14802603 to 14802637 34 - TSS region transcription start site region 32647
Tssr32648 3 14808358 to 14808373 15 - TSS region transcription start site region 32648
Tssr824 3 14808385 to 14808399 14 - TSS region transcription start site region 824
Tssr825 3 14808409 to 14808421 12 - TSS region transcription start site region 825
Gm41999 3 14825509 to 14864243 38734 - lncRNA gene predicted gene, 41999
Tssr28428 3 14862805 to 14862833 28 + TSS region transcription start site region 28428
Tssr28429 3 14862840 to 14862855 15 + TSS region transcription start site region 28429
Tssr32649 3 14863235 to 14863254 19 - TSS region transcription start site region 32649
Tssr28430 3 14863428 to 14863446 18 + TSS region transcription start site region 28430
Tssr28431 3 14863451 to 14863467 16 + TSS region transcription start site region 28431
Tssr28432 3 14863476 to 14863483 7 + TSS region transcription start site region 28432
Tssr28433 3 14863486 to 14863494 8 + TSS region transcription start site region 28433
Tssr28434 3 14863495 to 14863521 26 + TSS region transcription start site region 28434
Car3 3 14863538 to 14872381 8843 + protein coding gene carbonic anhydrase 3
Tssr32650 3 14863921 to 14863937 16 - TSS region transcription start site region 32650
Tssr32651 3 14864042 to 14864054 12 - TSS region transcription start site region 32651
Tssr32652 3 14864057 to 14864071 14 - TSS region transcription start site region 32652
Tssr28435 3 14864162 to 14864173 11 + TSS region transcription start site region 28435
Tssr28436 3 14864241 to 14864258 17 + TSS region transcription start site region 28436
Tssr28437 3 14864287 to 14864341 54 + TSS region transcription start site region 28437
Tssr28438 3 14865453 to 14865494 41 + TSS region transcription start site region 28438
Tssr28439 3 14866801 to 14866844 43 + TSS region transcription start site region 28439
Tssr28440 3 14866853 to 14866871 18 + TSS region transcription start site region 28440
Tssr28441 3 14868385 to 14868402 17 + TSS region transcription start site region 28441
Tssr28442 3 14869216 to 14869224 8 + TSS region transcription start site region 28442
Tssr28443 3 14869239 to 14869260 21 + TSS region transcription start site region 28443
Tssr28444 3 14870028 to 14870037 9 + TSS region transcription start site region 28444
Tssr28445 3 14870039 to 14870084 45 + TSS region transcription start site region 28445
Tssr28446 3 14870094 to 14870137 43 + TSS region transcription start site region 28446
Tssr28447 3 14870141 to 14870163 22 + TSS region transcription start site region 28447
Tssr28448 3 14871545 to 14871546 1 + TSS region transcription start site region 28448
Tssr28449 3 14871599 to 14871610 11 + TSS region transcription start site region 28449
Tssr28450 3 14871636 to 14871653 17 + TSS region transcription start site region 28450
Tssr28451 3 14871661 to 14871670 9 + TSS region transcription start site region 28451
Tssr28452 3 14871682 to 14871692 10 + TSS region transcription start site region 28452
Tssr28453 3 14871700 to 14871705 5 + TSS region transcription start site region 28453
Tssr28454 3 14871709 to 14871717 8 + TSS region transcription start site region 28454
Tssr28455 3 14871724 to 14871735 11 + TSS region transcription start site region 28455
Tssr32653 3 14871745 to 14871804 59 - TSS region transcription start site region 32653
Tssr28456 3 14871767 to 14871772 5 + TSS region transcription start site region 28456
Tssr28457 3 14871833 to 14871834 1 + TSS region transcription start site region 28457
Tssr28458 3 14872020 to 14872031 11 + TSS region transcription start site region 28458
Tssr28459 3 14872045 to 14872068 23 + TSS region transcription start site region 28459
Tssr28460 3 14872151 to 14872154 3 + TSS region transcription start site region 28460
Tssr28461 3 14872201 to 14872210 9 + TSS region transcription start site region 28461
Tssr28462 3 14872240 to 14872247 7 + TSS region transcription start site region 28462
Tssr28463 3 14872293 to 14872298 5 + TSS region transcription start site region 28463
Tssr28464 3 14872320 to 14872339 19 + TSS region transcription start site region 28464
Tssr28465 3 14872461 to 14872478 17 + TSS region transcription start site region 28465
Tssr32654 3 14872519 to 14872537 18 - TSS region transcription start site region 32654
Cpgi12992 3 14886015 to 14887214 1199 CpG island CpG island 12992
Tssr826 3 14886204 to 14886320 116 + TSS region transcription start site region 826
Car2 3 14886278 to 14900770 14492 + protein coding gene carbonic anhydrase 2
Tssr827 3 14886418 to 14886427 9 + TSS region transcription start site region 827
Tssr828 3 14886434 to 14886483 49 + TSS region transcription start site region 828
Tssr829 3 14886524 to 14886569 45 + TSS region transcription start site region 829
Tssr830 3 14886605 to 14886615 10 + TSS region transcription start site region 830
Tssr831 3 14886626 to 14886648 22 + TSS region transcription start site region 831
Tssr28466 3 14886683 to 14886700 17 + TSS region transcription start site region 28466
Tssr832 3 14886715 to 14886721 6 + TSS region transcription start site region 832
Tssr28467 3 14886815 to 14886859 44 + TSS region transcription start site region 28467
Tssr28468 3 14887388 to 14887416 28 + TSS region transcription start site region 28468
Tssr28469 3 14970278 to 14970285 7 + TSS region transcription start site region 28469
A930001A20Rik 3 14971201 to 15002727 31526 + lincRNA gene RIKEN cDNA A930001A20 gene
Gm7132 3 14973569 to 14974552 983 - pseudogene predicted gene 7132
Tssr32655 3 14993966 to 14993970 4 - TSS region transcription start site region 32655
Tssr28470 3 15000910 to 15000951 41 + TSS region transcription start site region 28470
Gm42000 3 15055968 to 15061831 5863 + lncRNA gene predicted gene, 42000
Tssr28471 3 15056069 to 15056103 34 + TSS region transcription start site region 28471
Gm33819 3 15153012 to 15157285 4273 - lincRNA gene predicted gene, 33819
Gm9733 3 15296551 to 15332302 35751 - protein coding gene predicted gene 9733
Tssr32656 3 15332265 to 15332282 17 - TSS region transcription start site region 32656
Tssr32657 3 15332285 to 15332298 13 - TSS region transcription start site region 32657
Sirpb1a 3 15371661 to 15426522 54861 - protein coding gene signal-regulatory protein beta 1A
Sirpb1b 3 15495754 to 15575067 79313 - protein coding gene signal-regulatory protein beta 1B
Gm21014 3 15514358 to 15515637 1279 + pseudogene predicted gene, 21014
Gm37468 3 15547479 to 15548599 1120 + antisense lncRNA gene predicted gene, 37468
Sirpb1c 3 15795147 to 15848530 53383 - protein coding gene signal-regulatory protein beta 1C
Gm6321 3 15891466 to 15892555 1089 - pseudogene predicted gene 6321
Gm7343 3 15941772 to 15942830 1058 - pseudogene predicted gene 7343
Gm5150 3 15946871 to 16006371 59500 - protein coding gene predicted gene 5150
Tssr32658 3 16006328 to 16006335 7 - TSS region transcription start site region 32658
Tssr32659 3 16006344 to 16006361 17 - TSS region transcription start site region 32659
Tssr32660 3 16006381 to 16006400 19 - TSS region transcription start site region 32660
Gm24694 3 16013818 to 16013927 109 + miRNA gene predicted gene, 24694
Gm37836 3 16078150 to 16078324 174 - pseudogene predicted gene, 37836
Tssr28472 3 16099867 to 16099875 8 + TSS region transcription start site region 28472
Gm25863 3 16115615 to 16115943 328 - ribozyme gene predicted gene, 25863
Cpgi12993 3 16182881 to 16183923 1042 CpG island CpG island 12993
Tssr28473 3 16183177 to 16183206 29 + TSS region transcription start site region 28473
Tssr28474 3 16183208 to 16183280 72 + TSS region transcription start site region 28474
Ythdf3 3 16183212 to 16217037 33825 + protein coding gene YTH N6-methyladenosine RNA binding protein 3
Tssr28475 3 16183297 to 16183308 11 + TSS region transcription start site region 28475
Tssr833 3 16183613 to 16183618 5 - TSS region transcription start site region 833
Tssr32661 3 16183642 to 16183687 45 - TSS region transcription start site region 32661
Tssr32662 3 16183833 to 16183844 11 - TSS region transcription start site region 32662
Tssr28476 3 16183864 to 16183877 13 + TSS region transcription start site region 28476
Tssr28477 3 16196516 to 16196535 19 + TSS region transcription start site region 28477
Tssr28478 3 16214691 to 16214705 14 + TSS region transcription start site region 28478
Tssr32663 3 16257253 to 16257254 1 - TSS region transcription start site region 32663