Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:146704519-148109076

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ap6q 3 100465596 to 147339967 46874371 QTL alcohol preference 6 QTL
Orgwq5 3 107469620 to 147599053 40129433 QTL organ weight QTL 5
Sum2 3 136371919 to 147891026 11519107 heritable phenotypic marker suppressor of methyl CpG binding protein 2, 2
Hrtfm2 3 143564487 to 147339967 3775480 QTL heart failure modifier 2
Prkacb 3 146729579 to 146812946 83367 - protein coding gene protein kinase, cAMP dependent, catalytic, beta
Del(3Lphn2-Prkacb)1Hgc 3 146729579 to 148988730 2259151 chromosomal deletion deletion, Chr3, Human Genome Center 1
Tssr36053 3 146731248 to 146731258 10 - TSS region transcription start site region 36053
Tssr36054 3 146748022 to 146748055 33 - TSS region transcription start site region 36054
Tssr36055 3 146769955 to 146770019 64 - TSS region transcription start site region 36055
Tssr36056 3 146770025 to 146770089 64 - TSS region transcription start site region 36056
Tssr36057 3 146770132 to 146770146 14 - TSS region transcription start site region 36057
Tssr36058 3 146770218 to 146770251 33 - TSS region transcription start site region 36058
Tssr36059 3 146770447 to 146770456 9 - TSS region transcription start site region 36059
Tssr36060 3 146770547 to 146770566 19 - TSS region transcription start site region 36060
Tssr36061 3 146770576 to 146770602 26 - TSS region transcription start site region 36061
Tssr36062 3 146770603 to 146770664 61 - TSS region transcription start site region 36062
Tssr36063 3 146771348 to 146771351 3 - TSS region transcription start site region 36063
Tssr36064 3 146781213 to 146781251 38 - TSS region transcription start site region 36064
Tssr36065 3 146781351 to 146781431 80 - TSS region transcription start site region 36065
Gm19104 3 146803216 to 146803811 595 + pseudogene predicted gene, 19104
Cpgi13924 3 146812307 to 146813523 1216 CpG island CpG island 13924
Tssr36066 3 146812871 to 146812920 49 - TSS region transcription start site region 36066
Tssr36067 3 146812925 to 146812946 21 - TSS region transcription start site region 36067
Tssr36068 3 146812951 to 146812983 32 - TSS region transcription start site region 36068
Tssr36069 3 146812988 to 146813013 25 - TSS region transcription start site region 36069
Gm10288 3 146838811 to 146839347 536 - pseudogene predicted gene 10288
Tssr36070 3 146839365 to 146839367 2 - TSS region transcription start site region 36070
Cpgi13925 3 146852130 to 146852663 533 CpG island CpG island 13925
Tssr32369 3 146852359 to 146852438 79 + TSS region transcription start site region 32369
Ttll7 3 146852367 to 146984009 131642 + protein coding gene tubulin tyrosine ligase-like family, member 7
Tssr32370 3 146894328 to 146894333 5 + TSS region transcription start site region 32370
Tssr32371 3 146899177 to 146899192 15 + TSS region transcription start site region 32371
Tssr1089 3 146899457 to 146899512 55 + TSS region transcription start site region 1089
Tssr1090 3 147064430 to 147064433 3 + TSS region transcription start site region 1090
Gm29771 3 147096184 to 147128749 32565 + lincRNA gene predicted gene, 29771
Gm36726 3 147121561 to 147125770 4209 - lncRNA gene predicted gene, 36726
Cpgi13926 3 147181994 to 147182655 661 CpG island CpG island 13926
Gm6074 3 147192468 to 147192918 450 - pseudogene predicted gene 6074
Tssr36071 3 147204638 to 147204641 3 - TSS region transcription start site region 36071
Gm40171 3 147307242 to 147312815 5573 + lncRNA gene predicted gene, 40171
D3Mit261 3 147334834 to 147335025 191 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 261
D3Mit86 3 147339815 to 147339967 152 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 86
Gm36831 3 147389647 to 147399285 9638 + lincRNA gene predicted gene, 36831
Tssr32372 3 147389712 to 147389720 8 + TSS region transcription start site region 32372
Tssr32373 3 147389739 to 147389754 15 + TSS region transcription start site region 32373
Tssr32374 3 147399089 to 147399093 4 + TSS region transcription start site region 32374
Gm40172 3 147399358 to 147402766 3408 + lncRNA gene predicted gene, 40172
Gm37803 3 147404519 to 147409076 4557 - unclassified gene predicted gene, 37803
Gm37041 3 147428889 to 147433289 4400 + lincRNA gene predicted gene, 37041
D3Mit31 3 147598830 to 147599053 223 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 31
Orgwq4 3 147599053 to 30013439 -117585614 QTL organ weight QTL 4
Gm36888 3 147620811 to 147635647 14836 - lincRNA gene predicted gene, 36888
D3Mit1002 3 147696653 to 147696773 120 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 1002
D3Mit1003 3 147696749 to 147696912 163 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 1003
D3Mit321 3 147890916 to 147891026 110 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 321
Gm40173 3 147921349 to 147924264 2915 - lncRNA gene predicted gene, 40173
Gm40175 3 147968348 to 148019296 50948 + lncRNA gene predicted gene, 40175
Gm40174 3 147990699 to 147992264 1565 + lncRNA gene predicted gene, 40174
Alcp3 3 148031299 to 148031429 130 QTL alcohol preference locus 3, male specific
D3Mit200 3 148031299 to 148031429 130 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 200
Gm40176 3 148081348 to 148086769 5421 + lncRNA gene predicted gene, 40176