Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:146435071-146565092

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ssx2ip 3 146404642 to 146440144 35502 + protein coding gene synovial sarcoma, X 2 interacting protein
Cpgi13919 3 146450329 to 146450976 647 CpG island CpG island 13919
Ctbs 3 146450467 to 146465849 15382 + protein coding gene chitobiase
Tssr32348 3 146450467 to 146450503 36 + TSS region transcription start site region 32348
Tssr32349 3 146450518 to 146450536 18 + TSS region transcription start site region 32349
Tssr32350 3 146451623 to 146451628 5 + TSS region transcription start site region 32350
Spata1 3 146457196 to 146499753 42557 - protein coding gene spermatogenesis associated 1
Tssr36034 3 146477376 to 146477381 5 - TSS region transcription start site region 36034
Tssr36035 3 146495128 to 146495139 11 - TSS region transcription start site region 36035
Cpgi13920 3 146499337 to 146500523 1186 CpG island CpG island 13920
Tssr32351 3 146499705 to 146499764 59 + TSS region transcription start site region 32351
Tssr36036 3 146499721 to 146499803 82 - TSS region transcription start site region 36036
Tssr36037 3 146499807 to 146499818 11 - TSS region transcription start site region 36037
Tssr32352 3 146499828 to 146499843 15 + TSS region transcription start site region 32352
Gng5 3 146499836 to 146505543 5707 + protein coding gene guanine nucleotide binding protein (G protein), gamma 5
Tssr32353 3 146499850 to 146499886 36 + TSS region transcription start site region 32353
Tssr32354 3 146500071 to 146500092 21 + TSS region transcription start site region 32354
Tssr36038 3 146500088 to 146500122 34 - TSS region transcription start site region 36038
Tssr32355 3 146500131 to 146500134 3 + TSS region transcription start site region 32355
Tssr32356 3 146500161 to 146500185 24 + TSS region transcription start site region 32356
Tssr32357 3 146500189 to 146500211 22 + TSS region transcription start site region 32357
Rpf1 3 146506340 to 146521437 15097 - protein coding gene ribosome production factor 1 homolog
Cpgi13921 3 146520696 to 146521564 868 CpG island CpG island 13921
Tssr32358 3 146521156 to 146521183 27 + TSS region transcription start site region 32358
Tssr36039 3 146521396 to 146521430 34 - TSS region transcription start site region 36039
Tssr32359 3 146549199 to 146549204 5 + TSS region transcription start site region 32359
Gm36259 3 146562878 to 146563269 391 - pseudogene predicted gene, 36259