Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:146298942-146458946

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccs3 3 132048775 to 146311914 14263139 QTL colon cancer susceptibility 3
D3Mit292 3 146311796 to 146311914 118 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 292
Gm43334 3 146324420 to 146325737 1317 + unclassified gene predicted gene 43334
Tssr32343 3 146325280 to 146325282 2 + TSS region transcription start site region 32343
D3Mit259 3 146337217 to 146337306 89 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 259
D3Mit259.1 3 146337399 to 146337511 112 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 259.1
Cpgi13916 3 146345285 to 146345514 229 CpG island CpG island 13916
Gm40167 3 146346434 to 146351214 4780 + lncRNA gene predicted gene, 40167
Gm10636 3 146367153 to 146378944 11791 - lincRNA gene predicted gene 10636
Tssr36032 3 146378942 to 146378946 4 - TSS region transcription start site region 36032
Gm22078 3 146387742 to 146387844 102 - snRNA gene predicted gene, 22078
Cpgi13917 3 146392918 to 146393173 255 CpG island CpG island 13917
Gm22901 3 146399134 to 146399217 83 - miRNA gene predicted gene, 22901
Cpgi13918 3 146404151 to 146405416 1265 CpG island CpG island 13918
Tssr32344 3 146404631 to 146404738 107 + TSS region transcription start site region 32344
Ssx2ip 3 146404642 to 146440144 35502 + protein coding gene synovial sarcoma, X 2 interacting protein
Tssr32345 3 146404815 to 146404833 18 + TSS region transcription start site region 32345
Tssr32346 3 146404844 to 146404877 33 + TSS region transcription start site region 32346
Tssr1085 3 146404954 to 146404966 12 + TSS region transcription start site region 1085
Tssr32347 3 146405008 to 146405030 22 + TSS region transcription start site region 32347
Tssr36033 3 146405794 to 146405828 34 - TSS region transcription start site region 36033
Cpgi13919 3 146450329 to 146450976 647 CpG island CpG island 13919
Tssr32348 3 146450467 to 146450503 36 + TSS region transcription start site region 32348
Ctbs 3 146450467 to 146465849 15382 + protein coding gene chitobiase
Tssr32349 3 146450518 to 146450536 18 + TSS region transcription start site region 32349
Tssr32350 3 146451623 to 146451628 5 + TSS region transcription start site region 32350
Spata1 3 146457196 to 146499753 42557 - protein coding gene spermatogenesis associated 1