Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:145903686-146073695

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13908 3 145923877 to 145925056 1179 CpG island CpG island 13908
Bcl10 3 145924262 to 145934366 10104 + protein coding gene B cell leukemia/lymphoma 10
Tssr32312 3 145924280 to 145924297 17 + TSS region transcription start site region 32312
Tssr32313 3 145924303 to 145924378 75 + TSS region transcription start site region 32313
Tssr32314 3 145924380 to 145924391 11 + TSS region transcription start site region 32314
Tssr32315 3 145924405 to 145924412 7 + TSS region transcription start site region 32315
Tssr32316 3 145924438 to 145924449 11 + TSS region transcription start site region 32316
Tssr36025 3 145924873 to 145924895 22 - TSS region transcription start site region 36025
Tssr36026 3 145924909 to 145924923 14 - TSS region transcription start site region 36026
Cpgi13909 3 145937884 to 145938995 1111 CpG island CpG island 13909
Tssr32317 3 145938004 to 145938063 59 + TSS region transcription start site region 32317
2410004B18Rik 3 145938014 to 145944829 6815 + protein coding gene RIKEN cDNA 2410004B18 gene
D3Mit85 3 145946978 to 145947193 215 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 85
Tssr32318 3 145962672 to 145962678 6 + TSS region transcription start site region 32318
Cpgi13910 3 145963430 to 145963585 155 CpG island CpG island 13910
Gm35352 3 145983052 to 145987454 4402 - lncRNA gene predicted gene, 35352
Cpgi13911 3 145987355 to 145989238 1883 CpG island CpG island 13911
Tssr32319 3 145987835 to 145987901 66 + TSS region transcription start site region 32319
Syde2 3 145987870 to 146021720 33850 + protein coding gene synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
Tssr32320 3 145988645 to 145988659 14 + TSS region transcription start site region 32320
Tssr32321 3 145988670 to 145988683 13 + TSS region transcription start site region 32321
Tssr1083 3 145988686 to 145988695 9 + TSS region transcription start site region 1083
Gm40166 3 146004086 to 146030765 26679 - lncRNA gene predicted gene, 40166
D3Mit260 3 146008001 to 146008206 205 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 260
Tssr32322 3 146012079 to 146012084 5 + TSS region transcription start site region 32322
Gm35409 3 146038445 to 146039840 1395 + lincRNA gene predicted gene, 35409
Wdr63 3 146040526 to 146108108 67582 - protein coding gene WD repeat domain 63