MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:145642407-145662456

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ccn1	3	145646976 to 145649981	3005	-	protein coding gene	cellular communication network factor 1
Cpgi13904	3	145647363 to 145647736	373		CpG island	CpG island 13904
Tssr36019	3	145648710 to 145648728	18	-	TSS region	transcription start site region 36019
Cpgi13905	3	145649207 to 145650143	936		CpG island	CpG island 13905
Tssr36020	3	145649266 to 145649280	14	-	TSS region	transcription start site region 36020
Tssr36021	3	145649704 to 145649709	5	-	TSS region	transcription start site region 36021
Tssr36022	3	145649970 to 145649992	22	-	TSS region	transcription start site region 36022
Gm17501	3	145650312 to 145677580	27268	+	lincRNA gene	predicted gene, 17501
D3Mit113.2	3	145650893 to 145651060	167		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 113.2
D3Mit113	3	145651045 to 145651180	135		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 113
D3Mit113.1	3	145651195 to 145651337	142		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 113.1
Tssr36023	3	145651441 to 145651452	11	-	TSS region	transcription start site region 36023
Tssr32291	3	145652089 to 145652109	20	+	TSS region	transcription start site region 32291
Tssr32292	3	145652361 to 145652377	16	+	TSS region	transcription start site region 32292
Tssr32293	3	145652407 to 145652456	49	+	TSS region	transcription start site region 32293
Cpgi13906	3	145652767 to 145653832	1065		CpG island	CpG island 13906