Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:145546976-145749981

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Col24a1	3	145292472 to 145552011	259539	+	protein coding gene	collagen, type XXIV, alpha 1
Cpgi13903	3	145576010 to 145576688	678		CpG island	CpG island 13903
Tssr32288	3	145576154 to 145576167	13	+	TSS region	transcription start site region 32288
Tssr32289	3	145576196 to 145576266	70	+	TSS region	transcription start site region 32289
Znhit6	3	145576205 to 145604795	28590	+	protein coding gene	zinc finger, HIT type 6
Tssr32290	3	145576454 to 145576492	38	+	TSS region	transcription start site region 32290
Gm40164	3	145629457 to 145633187	3730	-	lncRNA gene	predicted gene, 40164
Ccn1	3	145646976 to 145649981	3005	-	protein coding gene	cellular communication network factor 1
Cpgi13904	3	145647363 to 145647736	373		CpG island	CpG island 13904
Tssr36019	3	145648710 to 145648728	18	-	TSS region	transcription start site region 36019
Cpgi13905	3	145649207 to 145650143	936		CpG island	CpG island 13905
Tssr36020	3	145649266 to 145649280	14	-	TSS region	transcription start site region 36020
Tssr36021	3	145649704 to 145649709	5	-	TSS region	transcription start site region 36021
Tssr36022	3	145649970 to 145649992	22	-	TSS region	transcription start site region 36022
Gm17501	3	145650312 to 145677580	27268	+	lincRNA gene	predicted gene, 17501
D3Mit113.2	3	145650893 to 145651060	167		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 113.2
D3Mit113	3	145651045 to 145651180	135		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 113
D3Mit113.1	3	145651195 to 145651337	142		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 113.1
Tssr36023	3	145651441 to 145651452	11	-	TSS region	transcription start site region 36023
Tssr32291	3	145652089 to 145652109	20	+	TSS region	transcription start site region 32291
Tssr32292	3	145652361 to 145652377	16	+	TSS region	transcription start site region 32292
Tssr32293	3	145652407 to 145652456	49	+	TSS region	transcription start site region 32293
Cpgi13906	3	145652767 to 145653832	1065		CpG island	CpG island 13906
Gm43408	3	145738727 to 145739166	439	-	pseudogene	predicted gene 43408