Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:144942537-145642569

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm16233 3 144947561 to 144954878 7317 + antisense lncRNA gene predicted gene 16233
Tssr32279 3 144947778 to 144947816 38 + TSS region transcription start site region 32279
Clca4a 3 144952486 to 144975045 22559 - protein coding gene chloride channel accessory 4A
Gm35066 3 144972124 to 144982560 10436 + lncRNA gene predicted gene, 35066
Tssr36007 3 144975040 to 144975046 6 - TSS region transcription start site region 36007
Clca1 3 145004537 to 145032776 28239 - protein coding gene chloride channel accessory 1
Tssr36008 3 145009821 to 145009838 17 - TSS region transcription start site region 36008
Tssr36009 3 145009886 to 145009897 11 - TSS region transcription start site region 36009
Tssr36010 3 145018682 to 145018696 14 - TSS region transcription start site region 36010
Tssr36011 3 145018729 to 145018744 15 - TSS region transcription start site region 36011
Tssr36012 3 145018942 to 145018969 27 - TSS region transcription start site region 36012
Tssr36013 3 145024580 to 145024596 16 - TSS region transcription start site region 36013
Tssr32280 3 145027353 to 145027379 26 + TSS region transcription start site region 32280
Tssr36014 3 145032765 to 145032781 16 - TSS region transcription start site region 36014
Tssr36015 3 145032869 to 145032898 29 - TSS region transcription start site region 36015
Tssr36016 3 145032957 to 145032969 12 - TSS region transcription start site region 36016
Clca2 3 145070263 to 145099443 29180 - protein coding gene chloride channel accessory 2
Tssr32281 3 145096843 to 145096857 14 + TSS region transcription start site region 32281
Tssr36017 3 145099024 to 145099075 51 - TSS region transcription start site region 36017
Gm40163 3 145116822 to 145118392 1570 - lncRNA gene predicted gene, 40163
Cpgi13902 3 145118323 to 145119194 871 CpG island CpG island 13902
Tssr32282 3 145118564 to 145118622 58 + TSS region transcription start site region 32282
Odf2l 3 145118588 to 145153915 35327 + protein coding gene outer dense fiber of sperm tails 2-like
Tssr32283 3 145118883 to 145118934 51 + TSS region transcription start site region 32283
Tssr1077 3 145160154 to 145160157 3 + TSS region transcription start site region 1077
Tssr36018 3 145195816 to 145195817 1 - TSS region transcription start site region 36018
Col24a1 3 145292472 to 145552011 259539 + protein coding gene collagen, type XXIV, alpha 1
Tssr32284 3 145292509 to 145292536 27 + TSS region transcription start site region 32284
Tssr32285 3 145292537 to 145292569 32 + TSS region transcription start site region 32285
Tssr32286 3 145292697 to 145292714 17 + TSS region transcription start site region 32286
Tssr32287 3 145292716 to 145292776 60 + TSS region transcription start site region 32287
Gm35133 3 145388811 to 145394270 5459 - lncRNA gene predicted gene, 35133
9530034A14Rik 3 145416012 to 145418044 2032 - antisense lncRNA gene RIKEN cDNA 9530034A14 gene
D530037P16Rik 3 145419326 to 145420352 1026 + sense overlapping lncRNA gene RIKEN cDNA D530037P16 gene
Cpgi13903 3 145576010 to 145576688 678 CpG island CpG island 13903
Tssr32288 3 145576154 to 145576167 13 + TSS region transcription start site region 32288
Tssr32289 3 145576196 to 145576266 70 + TSS region transcription start site region 32289
Znhit6 3 145576205 to 145604795 28590 + protein coding gene zinc finger, HIT type 6
Tssr32290 3 145576454 to 145576492 38 + TSS region transcription start site region 32290
Gm40164 3 145629457 to 145633187 3730 - lncRNA gene predicted gene, 40164