Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:144729322-145046011

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clca3a1 3 144729677 to 144760977 31300 - protein coding gene chloride channel accessory 3A1
Gm34866 3 144749482 to 144750087 605 + antisense lncRNA gene predicted gene, 34866
D3Mit161a 3 144758867 to 144758983 116 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 161a
Tssr36000 3 144760729 to 144760746 17 - TSS region transcription start site region 36000
Tssr1076 3 144760756 to 144760767 11 - TSS region transcription start site region 1076
Tssr36001 3 144760794 to 144760809 15 - TSS region transcription start site region 36001
Tssr36002 3 144760859 to 144760868 9 - TSS region transcription start site region 36002
Gm17743 3 144779012 to 144780686 1674 + pseudogene predicted gene, 17743
Clca3a2 3 144796559 to 144819494 22935 - protein coding gene chloride channel accessory 3A2
Gm43240 3 144808376 to 144813538 5162 + antisense lncRNA gene predicted gene 43240
D3Mit161b 3 144817611 to 144817737 126 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 161b
Clca3b 3 144822623 to 144849302 26679 - protein coding gene chloride channel accessory 3B
Tssr36003 3 144827347 to 144827389 42 - TSS region transcription start site region 36003
Gm16215 3 144847601 to 144848120 519 + pseudogene predicted gene 16215
Tssr36004 3 144849301 to 144849302 1 - TSS region transcription start site region 36004
Clca4c-ps 3 144879322 to 144896011 16689 - pseudogene chloride channel accessory 4C, pseudogene
Tssr36005 3 144889773 to 144889779 6 - TSS region transcription start site region 36005
Clca4b 3 144910921 to 144932529 21608 - protein coding gene chloride channel accessory 4B
Tssr36006 3 144932523 to 144932536 13 - TSS region transcription start site region 36006
Gm16233 3 144947561 to 144954878 7317 + antisense lncRNA gene predicted gene 16233
Tssr32279 3 144947778 to 144947816 38 + TSS region transcription start site region 32279
Clca4a 3 144952486 to 144975045 22559 - protein coding gene chloride channel accessory 4A
Gm35066 3 144972124 to 144982560 10436 + lncRNA gene predicted gene, 35066
Tssr36007 3 144975040 to 144975046 6 - TSS region transcription start site region 36007
Clca1 3 145004537 to 145032776 28239 - protein coding gene chloride channel accessory 1
Tssr36008 3 145009821 to 145009838 17 - TSS region transcription start site region 36008
Tssr36009 3 145009886 to 145009897 11 - TSS region transcription start site region 36009
Tssr36010 3 145018682 to 145018696 14 - TSS region transcription start site region 36010
Tssr36011 3 145018729 to 145018744 15 - TSS region transcription start site region 36011
Tssr36012 3 145018942 to 145018969 27 - TSS region transcription start site region 36012
Tssr36013 3 145024580 to 145024596 16 - TSS region transcription start site region 36013
Tssr32280 3 145027353 to 145027379 26 + TSS region transcription start site region 32280
Tssr36014 3 145032765 to 145032781 16 - TSS region transcription start site region 36014
Tssr36015 3 145032869 to 145032898 29 - TSS region transcription start site region 36015
Tssr36016 3 145032957 to 145032969 12 - TSS region transcription start site region 36016