Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:144380008-144620216

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm34434	3	144377476 to 144382155	4679	-	lncRNA gene	predicted gene, 34434
Cpgi13897	3	144380981 to 144381232	251		CpG island	CpG island 13897
Cpgi13898	3	144396572 to 144396791	219		CpG island	CpG island 13898
Gm5857	3	144427180 to 144427672	492	-	pseudogene	predicted gene 5857
Hs2st1	3	144430008 to 144570216	140208	-	protein coding gene	heparan sulfate 2-O-sulfotransferase 1
Gm43707	3	144493986 to 144497172	3186	-	sense intronic lncRNA gene	predicted gene 43707
Gm43560	3	144523229 to 144524001	772	-	sense intronic lncRNA gene	predicted gene 43560
Gm46829	3	144540766 to 144555583	14817	-	lncRNA gene	predicted gene, 46829
Tssr35977	3	144555323 to 144555365	42	-	TSS region	transcription start site region 35977
Cpgi13899	3	144561646 to 144561849	203		CpG island	CpG island 13899
Cpgi13900	3	144568887 to 144571029	2142		CpG island	CpG island 13900
Tssr32262	3	144569982 to 144569989	7	+	TSS region	transcription start site region 32262
Tssr35978	3	144570136 to 144570227	91	-	TSS region	transcription start site region 35978
Tssr32263	3	144570279 to 144570284	5	+	TSS region	transcription start site region 32263
Tssr32264	3	144570304 to 144570309	5	+	TSS region	transcription start site region 32264
Tssr32265	3	144570372 to 144570383	11	+	TSS region	transcription start site region 32265
Tssr32266	3	144570396 to 144570407	11	+	TSS region	transcription start site region 32266
Tssr32267	3	144570409 to 144570490	81	+	TSS region	transcription start site region 32267
Selenof	3	144570427 to 144597677	27250	+	protein coding gene	selenoprotein F
Tssr32268	3	144570556 to 144570571	15	+	TSS region	transcription start site region 32268
Tssr32269	3	144570687 to 144570721	34	+	TSS region	transcription start site region 32269
Tssr32270	3	144577594 to 144577614	20	+	TSS region	transcription start site region 32270
Gm24406	3	144586825 to 144586952	127	-	snoRNA gene	predicted gene, 24406
9430014F16Rik	3	144590424 to 144591956	1532		unclassified gene	RIKEN cDNA 9430014F16 gene
Tssr32271	3	144597045 to 144597098	53	+	TSS region	transcription start site region 32271