Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Ap6q | 3 | 46874371 | QTL | alcohol preference 6 QTL | ||
Orgwq5 | 3 | 40129433 | QTL | organ weight QTL 5 | ||
Mhdadsk6 | 3 | 11344603 | heritable phenotypic marker | Martin Hrabe de Angelis dark skin 6 | ||
Mhdadsk8 | 3 | 11344603 | heritable phenotypic marker | Martin Hrabe de Angelis dark skin 8 | ||
Ccs3 | 3 | 14263139 | QTL | colon cancer susceptibility 3 | ||
D3Mit127 | 3 | 174 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 127 | ||
A830019L24Rik | 3 | 14941 | + | lincRNA gene | RIKEN cDNA A830019L24 gene | |
D3Mit258 | 3 | 216 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 258 | ||
Gm40159 | 3 | 101287 | - | lncRNA gene | predicted gene, 40159 | |
Gm33514 | 3 | 2879 | + | lncRNA gene | predicted gene, 33514 | |
Gm43613 | 3 | 1612 | + | lincRNA gene | predicted gene 43613 | |
Gm43612 | 3 | 3206 | + | lincRNA gene | predicted gene 43612 | |
1700001N15Rik | 3 | 2131 | + | lincRNA gene | RIKEN cDNA 1700001N15 gene | |
Gm33604 | 3 | 16936 | - | lncRNA gene | predicted gene, 33604 | |
D3Mit320 | 3 | 119 | DNA segment | DNA Segment, Chr 3, Massachusetts Institute of Technology 320 | ||
Pstc1 | 3 | 119 | QTL | periosteal circumference 1 | ||
Hrtfm2 | 3 | 3775480 | QTL | heart failure modifier 2 | ||
Gm43616 | 3 | 1468 | - | lincRNA gene | predicted gene 43616 | |
Gm33651 | 3 | 12556 | + | lincRNA gene | predicted gene, 33651 | |
Gm33758 | 3 | 20770 | + | lincRNA gene | predicted gene, 33758 | |
Gm38006 | 3 | 6063 | + | unclassified gene | predicted gene, 38006 | |
Gm33809 | 3 | 20969 | + | lncRNA gene | predicted gene, 33809 | |
Letohc1 | 3 | 197 | QTL | low ethanol consumption 1 | ||
Scc7 | 3 | 13011246 | QTL | colon tumor susceptibility 7 | ||
D3Mit17 | 3 | 197 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 17 | ||
Sles3 | 3 | -106526709 | QTL | systemic lupus erythmatosus suppressor 3 | ||
Gm42704 | 3 | 1777 | + | lincRNA gene | predicted gene 42704 | |
Gm6260 | 3 | 41251 | - | lincRNA gene | predicted gene 6260 | |
Gm24728 | 3 | 124 | + | snoRNA gene | predicted gene, 24728 | |
Gm33867 | 3 | 29665 | + | lncRNA gene | predicted gene, 33867 | |
Gm42705 | 3 | 83635 | + | lincRNA gene | predicted gene 42705 | |
Fpli | 3 | 166 | QTL | fasting plasma insulin | ||
D3Mit84 | 3 | 166 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 84 | ||
Gm42706 | 3 | 1909 | + | lincRNA gene | predicted gene 42706 | |
D3Mit198 | 3 | 125 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 198 | ||
Gm33925 | 3 | 50735 | + | lncRNA gene | predicted gene, 33925 | |
Gm40160 | 3 | 12954 | - | lncRNA gene | predicted gene, 40160 | |
Gm2505 | 3 | 824 | + | pseudogene | predicted gene 2505 | |
Gm42707 | 3 | 76381 | - | lincRNA gene | predicted gene 42707 | |
Gm42708 | 3 | 904 | + | lincRNA gene | predicted gene 42708 | |
Tssr35954 | 3 | 1 | - | TSS region | transcription start site region 35954 | |
Gm33988 | 3 | 13922 | + | lncRNA gene | predicted gene, 33988 | |
Tssr32256 | 3 | 7 | + | TSS region | transcription start site region 32256 | |
Gm40161 | 3 | 35800 | - | lncRNA gene | predicted gene, 40161 | |
Tssr1071 | 3 | 9 | - | TSS region | transcription start site region 1071 | |
Gm34078 | 3 | 3667 | - | lincRNA gene | predicted gene, 34078 | |
Tssr32257 | 3 | 28 | + | TSS region | transcription start site region 32257 | |
Tssr32258 | 3 | 17 | + | TSS region | transcription start site region 32258 | |
Gm34162 | 3 | 30394 | + | lncRNA gene | predicted gene, 34162 | |
Tssr32259 | 3 | 11 | + | TSS region | transcription start site region 32259 | |
Tssr35955 | 3 | 4 | - | TSS region | transcription start site region 35955 | |
Lmo4 | 3 | 16690 | - | protein coding gene | LIM domain only 4 | |
Tssr32260 | 3 | 22 | + | TSS region | transcription start site region 32260 | |
Tssr35956 | 3 | 11 | - | TSS region | transcription start site region 35956 | |
Tssr35957 | 3 | 34 | - | TSS region | transcription start site region 35957 | |
Tssr35958 | 3 | 17 | - | TSS region | transcription start site region 35958 | |
Tssr35959 | 3 | 19 | - | TSS region | transcription start site region 35959 | |
Tssr35960 | 3 | 40 | - | TSS region | transcription start site region 35960 | |
Gm43445 | 3 | 2090 | - | sense intronic lncRNA gene | predicted gene 43445 | |
Cpgi13893 | 3 | 549 | CpG island | CpG island 13893 | ||
Tssr35961 | 3 | 4 | - | TSS region | transcription start site region 35961 | |
Tssr35962 | 3 | 16 | - | TSS region | transcription start site region 35962 | |
Cpgi13894 | 3 | 850 | CpG island | CpG island 13894 | ||
Tssr35963 | 3 | 38 | - | TSS region | transcription start site region 35963 | |
Tssr35964 | 3 | 7 | - | TSS region | transcription start site region 35964 | |
Tssr35965 | 3 | 45 | - | TSS region | transcription start site region 35965 | |
Tssr35966 | 3 | 17 | - | TSS region | transcription start site region 35966 | |
Tssr35967 | 3 | 36 | - | TSS region | transcription start site region 35967 | |
Cpgi13895 | 3 | 1410 | CpG island | CpG island 13895 | ||
Tssr35968 | 3 | 20 | - | TSS region | transcription start site region 35968 | |
Tssr35969 | 3 | 43 | - | TSS region | transcription start site region 35969 | |
Tssr35970 | 3 | 25 | - | TSS region | transcription start site region 35970 | |
Tssr35971 | 3 | 43 | - | TSS region | transcription start site region 35971 | |
Tssr35972 | 3 | 23 | - | TSS region | transcription start site region 35972 | |
Tssr35973 | 3 | 42 | - | TSS region | transcription start site region 35973 | |
Gm46828 | 3 | 11949 | - | lncRNA gene | predicted gene, 46828 | |
Tssr35974 | 3 | 16 | - | TSS region | transcription start site region 35974 | |
Tssr35975 | 3 | 23 | - | TSS region | transcription start site region 35975 | |
Tssr35976 | 3 | 46 | - | TSS region | transcription start site region 35976 | |
D3Mit197 | 3 | 188 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 197 | ||
Tssr32261 | 3 | 25 | + | TSS region | transcription start site region 32261 | |
Gm43446 | 3 | 1095 | + | lincRNA gene | predicted gene 43446 | |
Gm43447 | 3 | 1534 | + | lincRNA gene | predicted gene 43447 | |
Tssr1072 | 3 | 7 | + | TSS region | transcription start site region 1072 | |
Cpgi13896 | 3 | 338 | CpG island | CpG island 13896 | ||
Gm34434 | 3 | 4679 | - | lncRNA gene | predicted gene, 34434 | |
Cpgi13897 | 3 | 251 | CpG island | CpG island 13897 | ||
Cpgi13898 | 3 | 219 | CpG island | CpG island 13898 | ||
Gm5857 | 3 | 492 | - | pseudogene | predicted gene 5857 | |
Hs2st1 | 3 | 140208 | - | protein coding gene | heparan sulfate 2-O-sulfotransferase 1 | |
Gm43707 | 3 | 3186 | - | sense intronic lncRNA gene | predicted gene 43707 | |
Gm43560 | 3 | 772 | - | sense intronic lncRNA gene | predicted gene 43560 | |
Gm46829 | 3 | 14817 | - | lncRNA gene | predicted gene, 46829 | |
Tssr35977 | 3 | 42 | - | TSS region | transcription start site region 35977 | |
Cpgi13899 | 3 | 203 | CpG island | CpG island 13899 | ||
Cpgi13900 | 3 | 2142 | CpG island | CpG island 13900 | ||
Tssr32262 | 3 | 7 | + | TSS region | transcription start site region 32262 | |
Tssr35978 | 3 | 91 | - | TSS region | transcription start site region 35978 | |
Tssr32263 | 3 | 5 | + | TSS region | transcription start site region 32263 | |
Tssr32264 | 3 | 5 | + | TSS region | transcription start site region 32264 | |
Tssr32265 | 3 | 11 | + | TSS region | transcription start site region 32265 | |
Tssr32266 | 3 | 11 | + | TSS region | transcription start site region 32266 | |
Tssr32267 | 3 | 81 | + | TSS region | transcription start site region 32267 | |
Selenof | 3 | 27250 | + | protein coding gene | selenoprotein F | |
Tssr32268 | 3 | 15 | + | TSS region | transcription start site region 32268 | |
Tssr32269 | 3 | 34 | + | TSS region | transcription start site region 32269 | |
Tssr32270 | 3 | 20 | + | TSS region | transcription start site region 32270 | |
Gm24406 | 3 | 127 | - | snoRNA gene | predicted gene, 24406 | |
9430014F16Rik | 3 | 1532 | unclassified gene | RIKEN cDNA 9430014F16 gene | ||
Tssr32271 | 3 | 53 | + | TSS region | transcription start site region 32271 | |
Rpl9-ps8 | 3 | 561 | - | pseudogene | ribosomal protein L9, pseudogene 8 | |
Tssr1073 | 3 | 1 | + | TSS region | transcription start site region 1073 | |
Tssr32272 | 3 | 16 | + | TSS region | transcription start site region 32272 | |
Tssr32273 | 3 | 33 | + | TSS region | transcription start site region 32273 | |
Tssr32274 | 3 | 21 | + | TSS region | transcription start site region 32274 | |
Sh3glb1 | 3 | 36657 | - | protein coding gene | SH3-domain GRB2-like B1 (endophilin) | |
Tssr32275 | 3 | 42 | + | TSS region | transcription start site region 32275 | |
Tssr35979 | 3 | 24 | - | TSS region | transcription start site region 35979 | |
Tssr35980 | 3 | 31 | - | TSS region | transcription start site region 35980 | |
Tssr35981 | 3 | 25 | - | TSS region | transcription start site region 35981 | |
Tssr32276 | 3 | 42 | + | TSS region | transcription start site region 32276 | |
Tssr35982 | 3 | 25 | - | TSS region | transcription start site region 35982 | |
Tssr35983 | 3 | 26 | - | TSS region | transcription start site region 35983 | |
Tssr35984 | 3 | 9 | - | TSS region | transcription start site region 35984 | |
Tssr35985 | 3 | 4 | - | TSS region | transcription start site region 35985 | |
Tssr32277 | 3 | 6 | + | TSS region | transcription start site region 32277 | |
Tssr35986 | 3 | 14 | - | TSS region | transcription start site region 35986 | |
Tssr35987 | 3 | 61 | - | TSS region | transcription start site region 35987 | |
Tssr35988 | 3 | 18 | - | TSS region | transcription start site region 35988 | |
Tssr35989 | 3 | 18 | - | TSS region | transcription start site region 35989 | |
Tssr35990 | 3 | 52 | - | TSS region | transcription start site region 35990 | |
Tssr35991 | 3 | 25 | - | TSS region | transcription start site region 35991 | |
Tssr35992 | 3 | 19 | - | TSS region | transcription start site region 35992 | |
Cpgi13901 | 3 | 1490 | CpG island | CpG island 13901 | ||
Tssr1074 | 3 | 29 | - | TSS region | transcription start site region 1074 | |
Tssr35993 | 3 | 140 | - | TSS region | transcription start site region 35993 | |
Tssr35994 | 3 | 17 | - | TSS region | transcription start site region 35994 | |
Tssr35995 | 3 | 31 | - | TSS region | transcription start site region 35995 | |
Tssr35996 | 3 | 21 | - | TSS region | transcription start site region 35996 | |
Tssr1075 | 3 | 7 | - | TSS region | transcription start site region 1075 | |
Tssr35997 | 3 | 15 | - | TSS region | transcription start site region 35997 | |
Tssr35998 | 3 | 8 | - | TSS region | transcription start site region 35998 | |
Tssr35999 | 3 | 14 | - | TSS region | transcription start site region 35999 | |
Tssr32278 | 3 | 18 | + | TSS region | transcription start site region 32278 | |
Gm9419 | 3 | 566 | + | pseudogene | predicted gene 9419 | |
Clca3a1 | 3 | 31300 | - | protein coding gene | chloride channel accessory 3A1 | |
Gm34866 | 3 | 605 | + | antisense lncRNA gene | predicted gene, 34866 | |
D3Mit161a | 3 | 116 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 161a | ||
Tssr36000 | 3 | 17 | - | TSS region | transcription start site region 36000 | |
Tssr1076 | 3 | 11 | - | TSS region | transcription start site region 1076 | |
Tssr36001 | 3 | 15 | - | TSS region | transcription start site region 36001 | |
Tssr36002 | 3 | 9 | - | TSS region | transcription start site region 36002 | |
Gm17743 | 3 | 1674 | + | pseudogene | predicted gene, 17743 | |
Clca3a2 | 3 | 22935 | - | protein coding gene | chloride channel accessory 3A2 | |
Gm43240 | 3 | 5162 | + | antisense lncRNA gene | predicted gene 43240 | |
D3Mit161b | 3 | 126 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 161b | ||
Clca3b | 3 | 26679 | - | protein coding gene | chloride channel accessory 3B | |
Tssr36003 | 3 | 42 | - | TSS region | transcription start site region 36003 | |
Gm16215 | 3 | 519 | + | pseudogene | predicted gene 16215 | |
Tssr36004 | 3 | 1 | - | TSS region | transcription start site region 36004 | |
Clca4c-ps | 3 | 16689 | - | pseudogene | chloride channel accessory 4C, pseudogene | |
Tssr36005 | 3 | 6 | - | TSS region | transcription start site region 36005 | |
Clca4b | 3 | 21608 | - | protein coding gene | chloride channel accessory 4B | |
Tssr36006 | 3 | 13 | - | TSS region | transcription start site region 36006 | |
Gm16233 | 3 | 7317 | + | antisense lncRNA gene | predicted gene 16233 | |
Tssr32279 | 3 | 38 | + | TSS region | transcription start site region 32279 | |
Clca4a | 3 | 22559 | - | protein coding gene | chloride channel accessory 4A | |
Gm35066 | 3 | 10436 | + | lncRNA gene | predicted gene, 35066 | |
Tssr36007 | 3 | 6 | - | TSS region | transcription start site region 36007 | |
Clca1 | 3 | 28239 | - | protein coding gene | chloride channel accessory 1 | |
Tssr36008 | 3 | 17 | - | TSS region | transcription start site region 36008 | |
Tssr36009 | 3 | 11 | - | TSS region | transcription start site region 36009 | |
Tssr36010 | 3 | 14 | - | TSS region | transcription start site region 36010 | |
Tssr36011 | 3 | 15 | - | TSS region | transcription start site region 36011 | |
Tssr36012 | 3 | 27 | - | TSS region | transcription start site region 36012 | |
Tssr36013 | 3 | 16 | - | TSS region | transcription start site region 36013 | |
Tssr32280 | 3 | 26 | + | TSS region | transcription start site region 32280 | |
Tssr36014 | 3 | 16 | - | TSS region | transcription start site region 36014 | |
Tssr36015 | 3 | 29 | - | TSS region | transcription start site region 36015 | |
Tssr36016 | 3 | 12 | - | TSS region | transcription start site region 36016 | |
Clca2 | 3 | 29180 | - | protein coding gene | chloride channel accessory 2 | |
Tssr32281 | 3 | 14 | + | TSS region | transcription start site region 32281 | |
Tssr36017 | 3 | 51 | - | TSS region | transcription start site region 36017 | |
Gm40163 | 3 | 1570 | - | lncRNA gene | predicted gene, 40163 | |
Cpgi13902 | 3 | 871 | CpG island | CpG island 13902 | ||
Tssr32282 | 3 | 58 | + | TSS region | transcription start site region 32282 | |
Odf2l | 3 | 35327 | + | protein coding gene | outer dense fiber of sperm tails 2-like | |
Tssr32283 | 3 | 51 | + | TSS region | transcription start site region 32283 | |
Tssr1077 | 3 | 3 | + | TSS region | transcription start site region 1077 | |
Tssr36018 | 3 | 1 | - | TSS region | transcription start site region 36018 | |
Col24a1 | 3 | 259539 | + | protein coding gene | collagen, type XXIV, alpha 1 | |
Tssr32284 | 3 | 27 | + | TSS region | transcription start site region 32284 | |
Tssr32285 | 3 | 32 | + | TSS region | transcription start site region 32285 | |
Tssr32286 | 3 | 17 | + | TSS region | transcription start site region 32286 | |
Tssr32287 | 3 | 60 | + | TSS region | transcription start site region 32287 | |
Gm35133 | 3 | 5459 | - | lncRNA gene | predicted gene, 35133 | |
9530034A14Rik | 3 | 2032 | - | antisense lncRNA gene | RIKEN cDNA 9530034A14 gene | |
D530037P16Rik | 3 | 1026 | + | sense overlapping lncRNA gene | RIKEN cDNA D530037P16 gene | |
Cpgi13903 | 3 | 678 | CpG island | CpG island 13903 | ||
Tssr32288 | 3 | 13 | + | TSS region | transcription start site region 32288 |