Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:142890420-143772032

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mhdadsk8 3 131906318 to 143250921 11344603 heritable phenotypic marker Martin Hrabe de Angelis dark skin 8
Mhdadsk6 3 131906318 to 143250921 11344603 heritable phenotypic marker Martin Hrabe de Angelis dark skin 6
Gm43646 3 142881588 to 142898245 16657 + unclassified non-coding RNA gene predicted gene 43646
9530052C20Rik 3 142882495 to 142892921 10426 + lincRNA gene RIKEN cDNA 9530052C20 gene
Gm31306 3 142898075 to 142898582 507 + pseudogene predicted gene, 31306
Tssr32252 3 142927467 to 142927491 24 + TSS region transcription start site region 32252
Gm33289 3 142957055 to 142969971 12916 - lncRNA gene predicted gene, 33289
Gm2574 3 142962611 to 142963612 1001 + pseudogene predicted pseudogene 2574
Tssr32253 3 143017122 to 143017148 26 + TSS region transcription start site region 32253
Tssr32254 3 143017149 to 143017168 19 + TSS region transcription start site region 32254
Tssr1070 3 143017210 to 143017220 10 + TSS region transcription start site region 1070
Tssr32255 3 143017244 to 143017276 32 + TSS region transcription start site region 32255
4930519L02Rik 3 143017660 to 143040752 23092 + lincRNA gene RIKEN cDNA 4930519L02 gene
Cpgi13892 3 143100651 to 143101186 535 CpG island CpG island 13892
Gm43614 3 143107948 to 143157903 49955 + lincRNA gene predicted gene 43614
D3Mit127 3 143185449 to 143185623 174 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 127
A830019L24Rik 3 143243055 to 143257996 14941 + lincRNA gene RIKEN cDNA A830019L24 gene
D3Mit258 3 143250705 to 143250921 216 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 258
Gm40159 3 143278152 to 143379439 101287 - lncRNA gene predicted gene, 40159
Gm33514 3 143323330 to 143326209 2879 + lncRNA gene predicted gene, 33514
Gm43613 3 143330420 to 143332032 1612 + lincRNA gene predicted gene 43613
Gm43612 3 143368576 to 143371782 3206 + lincRNA gene predicted gene 43612
1700001N15Rik 3 143409401 to 143411532 2131 + lincRNA gene RIKEN cDNA 1700001N15 gene
Gm33604 3 143479025 to 143495961 16936 - lncRNA gene predicted gene, 33604
Hrtfm2 3 143564487 to 147339967 3775480 QTL heart failure modifier 2
D3Mit320 3 143564487 to 143564606 119 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 320
Pstc1 3 143564487 to 143564606 119 QTL periosteal circumference 1
Gm43616 3 143575533 to 143577001 1468 - lincRNA gene predicted gene 43616
Gm33651 3 143576614 to 143589170 12556 + lincRNA gene predicted gene, 33651
Gm33758 3 143603805 to 143624575 20770 + lincRNA gene predicted gene, 33758
Gm38006 3 143644890 to 143650953 6063 + unclassified gene predicted gene, 38006
Gm33809 3 143645577 to 143666546 20969 + lncRNA gene predicted gene, 33809
Scc7 3 143647225 to 156658471 13011246 QTL colon tumor susceptibility 7
D3Mit17 3 143647225 to 143647422 197 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 17
Letohc1 3 143647225 to 143647422 197 QTL low ethanol consumption 1
Sles3 3 143647422 to 37120713 -106526709 QTL systemic lupus erythmatosus suppressor 3
Gm42704 3 143650310 to 143652087 1777 + lincRNA gene predicted gene 42704
Gm6260 3 143670892 to 143712143 41251 - lincRNA gene predicted gene 6260
Gm24728 3 143674943 to 143675067 124 + snoRNA gene predicted gene, 24728
Gm33867 3 143743121 to 143772786 29665 + lncRNA gene predicted gene, 33867
Gm42705 3 143743377 to 143827012 83635 + lincRNA gene predicted gene 42705
D3Mit84 3 143754753 to 143754919 166 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 84
Fpli 3 143754753 to 143754919 166 QTL fasting plasma insulin
Gm42706 3 143770539 to 143772448 1909 + lincRNA gene predicted gene 42706