Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:142880651-143321186

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mhdadsk8 3 131906318 to 143250921 11344603 heritable phenotypic marker Martin Hrabe de Angelis dark skin 8
Mhdadsk6 3 131906318 to 143250921 11344603 heritable phenotypic marker Martin Hrabe de Angelis dark skin 6
Pkn2 3 142790902 to 142882004 91102 - protein coding gene protein kinase N2
Cpgi13891 3 142881080 to 142882572 1492 CpG island CpG island 13891
Gm43646 3 142881588 to 142898245 16657 + unclassified non-coding RNA gene predicted gene 43646
Tssr1069 3 142881721 to 142881724 3 - TSS region transcription start site region 1069
Tssr35950 3 142881917 to 142881939 22 - TSS region transcription start site region 35950
Tssr35951 3 142881942 to 142882017 75 - TSS region transcription start site region 35951
Tssr35952 3 142882034 to 142882042 8 - TSS region transcription start site region 35952
Tssr35953 3 142882440 to 142882457 17 - TSS region transcription start site region 35953
9530052C20Rik 3 142882495 to 142892921 10426 + lincRNA gene RIKEN cDNA 9530052C20 gene
Gm31306 3 142898075 to 142898582 507 + pseudogene predicted gene, 31306
Tssr32252 3 142927467 to 142927491 24 + TSS region transcription start site region 32252
Gm33289 3 142957055 to 142969971 12916 - lncRNA gene predicted gene, 33289
Gm2574 3 142962611 to 142963612 1001 + pseudogene predicted pseudogene 2574
Tssr32253 3 143017122 to 143017148 26 + TSS region transcription start site region 32253
Tssr32254 3 143017149 to 143017168 19 + TSS region transcription start site region 32254
Tssr1070 3 143017210 to 143017220 10 + TSS region transcription start site region 1070
Tssr32255 3 143017244 to 143017276 32 + TSS region transcription start site region 32255
4930519L02Rik 3 143017660 to 143040752 23092 + lincRNA gene RIKEN cDNA 4930519L02 gene
Cpgi13892 3 143100651 to 143101186 535 CpG island CpG island 13892
Gm43614 3 143107948 to 143157903 49955 + lincRNA gene predicted gene 43614
D3Mit127 3 143185449 to 143185623 174 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 127
A830019L24Rik 3 143243055 to 143257996 14941 + lincRNA gene RIKEN cDNA A830019L24 gene
D3Mit258 3 143250705 to 143250921 216 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 258
Gm40159 3 143278152 to 143379439 101287 - lncRNA gene predicted gene, 40159