Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:142690902-142982004

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi13889	3	142700472 to 142701455	983		CpG island	CpG island 13889
Kyat3	3	142701019 to 142744911	43892	+	protein coding gene	kynurenine aminotransferase 3
Tssr32246	3	142701026 to 142701043	17	+	TSS region	transcription start site region 32246
Tssr32247	3	142701044 to 142701065	21	+	TSS region	transcription start site region 32247
Tssr32248	3	142701067 to 142701105	38	+	TSS region	transcription start site region 32248
Tssr32249	3	142712816 to 142712821	5	+	TSS region	transcription start site region 32249
Tssr32250	3	142731527 to 142731531	4	+	TSS region	transcription start site region 32250
Gm15540	3	142743661 to 142744681	1020	-	antisense lncRNA gene	predicted gene 15540
Cpgi13890	3	142764956 to 142765662	706		CpG island	CpG island 13890
Tssr32251	3	142765216 to 142765232	16	+	TSS region	transcription start site region 32251
Gtf2b	3	142765247 to 142783606	18359	+	protein coding gene	general transcription factor IIB
Gm24457	3	142772972 to 142773076	104	-	snRNA gene	predicted gene, 24457
Pkn2	3	142790902 to 142882004	91102	-	protein coding gene	protein kinase N2
Gm25965	3	142795102 to 142795194	92	+	snoRNA gene	predicted gene, 25965
D3Mit38	3	142830837 to 142830952	115		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 38
Tssr35949	3	142853695 to 142853719	24	-	TSS region	transcription start site region 35949
Cpgi13891	3	142881080 to 142882572	1492		CpG island	CpG island 13891
Gm43646	3	142881588 to 142898245	16657	+	unclassified non-coding RNA gene	predicted gene 43646
Tssr1069	3	142881721 to 142881724	3	-	TSS region	transcription start site region 1069
Tssr35950	3	142881917 to 142881939	22	-	TSS region	transcription start site region 35950
Tssr35951	3	142881942 to 142882017	75	-	TSS region	transcription start site region 35951
Tssr35952	3	142882034 to 142882042	8	-	TSS region	transcription start site region 35952
Tssr35953	3	142882440 to 142882457	17	-	TSS region	transcription start site region 35953
9530052C20Rik	3	142882495 to 142892921	10426	+	lincRNA gene	RIKEN cDNA 9530052C20 gene
Gm31306	3	142898075 to 142898582	507	+	pseudogene	predicted gene, 31306
Tssr32252	3	142927467 to 142927491	24	+	TSS region	transcription start site region 32252
Gm33289	3	142957055 to 142969971	12916	-	lncRNA gene	predicted gene, 33289
Gm2574	3	142962611 to 142963612	1001	+	pseudogene	predicted pseudogene 2574