Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:142636527-142826531

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gbp2 3 142620663 to 142638008 17345 + protein coding gene guanylate binding protein 2
Tssr32242 3 142637419 to 142637430 11 + TSS region transcription start site region 32242
Tssr32243 3 142637492 to 142637517 25 + TSS region transcription start site region 32243
Tssr32244 3 142637628 to 142637641 13 + TSS region transcription start site region 32244
Tssr32245 3 142637694 to 142637756 62 + TSS region transcription start site region 32245
Gbp2-ps 3 142658951 to 142663508 4557 + pseudogene guanylate binding protein 2, pseudogene
Gm19166 3 142664444 to 142665506 1062 - pseudogene predicted gene, 19166
Cpgi13888 3 142688076 to 142688333 257 CpG island CpG island 13888
Cpgi13889 3 142700472 to 142701455 983 CpG island CpG island 13889
Kyat3 3 142701019 to 142744911 43892 + protein coding gene kynurenine aminotransferase 3
Tssr32246 3 142701026 to 142701043 17 + TSS region transcription start site region 32246
Tssr32247 3 142701044 to 142701065 21 + TSS region transcription start site region 32247
Tssr32248 3 142701067 to 142701105 38 + TSS region transcription start site region 32248
Tssr32249 3 142712816 to 142712821 5 + TSS region transcription start site region 32249
Tssr32250 3 142731527 to 142731531 4 + TSS region transcription start site region 32250
Gm15540 3 142743661 to 142744681 1020 - antisense lncRNA gene predicted gene 15540
Cpgi13890 3 142764956 to 142765662 706 CpG island CpG island 13890
Tssr32251 3 142765216 to 142765232 16 + TSS region transcription start site region 32251
Gtf2b 3 142765247 to 142783606 18359 + protein coding gene general transcription factor IIB
Gm24457 3 142772972 to 142773076 104 - snRNA gene predicted gene, 24457
Pkn2 3 142790902 to 142882004 91102 - protein coding gene protein kinase N2
Gm25965 3 142795102 to 142795194 92 + snoRNA gene predicted gene, 25965