Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:142313548-142543698

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdlim5 3 142239590 to 142395696 156106 - protein coding gene PDZ and LIM domain 5
Tssr35934 3 142364276 to 142364281 5 - TSS region transcription start site region 35934
Tssr35935 3 142367292 to 142367293 1 - TSS region transcription start site region 35935
Tssr35936 3 142385005 to 142385012 7 - TSS region transcription start site region 35936
Cpgi13886 3 142394785 to 142396093 1308 CpG island CpG island 13886
Tssr35937 3 142395627 to 142395653 26 - TSS region transcription start site region 35937
Tssr35938 3 142395661 to 142395683 22 - TSS region transcription start site region 35938
D3Mit126 3 142428548 to 142428698 150 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 126
D3Mit257 3 142428548 to 142428672 124 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 257
Tssr35939 3 142430174 to 142430188 14 - TSS region transcription start site region 35939
Gm33189 3 142433740 to 142438896 5156 + lncRNA gene predicted gene, 33189
Tssr32047 3 142496772 to 142496789 17 + TSS region transcription start site region 32047
Tssr32048 3 142496791 to 142496804 13 + TSS region transcription start site region 32048
Tssr32049 3 142496815 to 142496830 15 + TSS region transcription start site region 32049
Tssr32050 3 142496873 to 142496892 19 + TSS region transcription start site region 32050
Tssr32051 3 142496924 to 142496939 15 + TSS region transcription start site region 32051
Gbp5 3 142496934 to 142522344 25410 + protein coding gene guanylate binding protein 5
Tssr32052 3 142500547 to 142500554 7 + TSS region transcription start site region 32052
Tssr32053 3 142500597 to 142500606 9 + TSS region transcription start site region 32053
Tssr32054 3 142500607 to 142500619 12 + TSS region transcription start site region 32054
Tssr32055 3 142500620 to 142500632 12 + TSS region transcription start site region 32055
Tssr32056 3 142500669 to 142500695 26 + TSS region transcription start site region 32056
Tssr32057 3 142501252 to 142501276 24 + TSS region transcription start site region 32057
Tssr32058 3 142501298 to 142501340 42 + TSS region transcription start site region 32058
Tssr32059 3 142501384 to 142501396 12 + TSS region transcription start site region 32059
Tssr32060 3 142501589 to 142501611 22 + TSS region transcription start site region 32060
Tssr32061 3 142501673 to 142501681 8 + TSS region transcription start site region 32061
Tssr35940 3 142501831 to 142501882 51 - TSS region transcription start site region 35940
Tssr32062 3 142503028 to 142503081 53 + TSS region transcription start site region 32062
Tssr35941 3 142503089 to 142503118 29 - TSS region transcription start site region 35941
Tssr32063 3 142503103 to 142503113 10 + TSS region transcription start site region 32063
Tssr32064 3 142503384 to 142503395 11 + TSS region transcription start site region 32064
Tssr32065 3 142503844 to 142503876 32 + TSS region transcription start site region 32065
Tssr32066 3 142504346 to 142504375 29 + TSS region transcription start site region 32066
Tssr32067 3 142504828 to 142504838 10 + TSS region transcription start site region 32067
Tssr32068 3 142505423 to 142505434 11 + TSS region transcription start site region 32068
Tssr32069 3 142505469 to 142505479 10 + TSS region transcription start site region 32069
Tssr32070 3 142505495 to 142505504 9 + TSS region transcription start site region 32070
Tssr32071 3 142505523 to 142505534 11 + TSS region transcription start site region 32071
Tssr32072 3 142505557 to 142505572 15 + TSS region transcription start site region 32072
Tssr32073 3 142505587 to 142505604 17 + TSS region transcription start site region 32073
Tssr32074 3 142505632 to 142505644 12 + TSS region transcription start site region 32074
Tssr32075 3 142505656 to 142505671 15 + TSS region transcription start site region 32075
Tssr32076 3 142505692 to 142505714 22 + TSS region transcription start site region 32076
Tssr32077 3 142505756 to 142505765 9 + TSS region transcription start site region 32077
Tssr32078 3 142505791 to 142505810 19 + TSS region transcription start site region 32078
Tssr32079 3 142505817 to 142505824 7 + TSS region transcription start site region 32079
Tssr32080 3 142506648 to 142506652 4 + TSS region transcription start site region 32080
Tssr32081 3 142506726 to 142506733 7 + TSS region transcription start site region 32081
Tssr32082 3 142506744 to 142506758 14 + TSS region transcription start site region 32082
Tssr32083 3 142506779 to 142506800 21 + TSS region transcription start site region 32083
Tssr32084 3 142506816 to 142506832 16 + TSS region transcription start site region 32084
Tssr32085 3 142506838 to 142506852 14 + TSS region transcription start site region 32085
Tssr32086 3 142506877 to 142506889 12 + TSS region transcription start site region 32086
Tssr32087 3 142507676 to 142507709 33 + TSS region transcription start site region 32087
Tssr32088 3 142507712 to 142507727 15 + TSS region transcription start site region 32088
Tssr32089 3 142507732 to 142507746 14 + TSS region transcription start site region 32089
Tssr32090 3 142507916 to 142507921 5 + TSS region transcription start site region 32090
Tssr32091 3 142507924 to 142507949 25 + TSS region transcription start site region 32091
Tssr32092 3 142507953 to 142507971 18 + TSS region transcription start site region 32092
Tssr32093 3 142508044 to 142508056 12 + TSS region transcription start site region 32093
Tssr32094 3 142508233 to 142508247 14 + TSS region transcription start site region 32094
Tssr32095 3 142509882 to 142509891 9 + TSS region transcription start site region 32095
Tssr32096 3 142510191 to 142510224 33 + TSS region transcription start site region 32096
Tssr32097 3 142510734 to 142510743 9 + TSS region transcription start site region 32097
Tssr32098 3 142511021 to 142511030 9 + TSS region transcription start site region 32098
Tssr32099 3 142511549 to 142511592 43 + TSS region transcription start site region 32099
Tssr32100 3 142512061 to 142512091 30 + TSS region transcription start site region 32100
Tssr32101 3 142512125 to 142512137 12 + TSS region transcription start site region 32101
Tssr32102 3 142512186 to 142512200 14 + TSS region transcription start site region 32102
Tssr32103 3 142519166 to 142519177 11 + TSS region transcription start site region 32103
Tssr32104 3 142519280 to 142519291 11 + TSS region transcription start site region 32104
Tssr32105 3 142519321 to 142519333 12 + TSS region transcription start site region 32105
Tssr32106 3 142519345 to 142519361 16 + TSS region transcription start site region 32106
Tssr32107 3 142519408 to 142519440 32 + TSS region transcription start site region 32107
Tssr32108 3 142519500 to 142519516 16 + TSS region transcription start site region 32108
Tssr32109 3 142520116 to 142520119 3 + TSS region transcription start site region 32109
Tssr32110 3 142520637 to 142520652 15 + TSS region transcription start site region 32110
Tssr32111 3 142521315 to 142521330 15 + TSS region transcription start site region 32111
Tssr32112 3 142521583 to 142521603 20 + TSS region transcription start site region 32112
Tssr32113 3 142521636 to 142521647 11 + TSS region transcription start site region 32113
Tssr32114 3 142521730 to 142521743 13 + TSS region transcription start site region 32114
Tssr32115 3 142522262 to 142522273 11 + TSS region transcription start site region 32115
Tssr32116 3 142530287 to 142530298 11 + TSS region transcription start site region 32116
Tssr32117 3 142530329 to 142530386 57 + TSS region transcription start site region 32117
Gbp7 3 142530342 to 142550149 19807 + protein coding gene guanylate binding protein 7
Cpgi13887 3 142530491 to 142530965 474 CpG island CpG island 13887
Tssr32118 3 142531874 to 142531885 11 + TSS region transcription start site region 32118
Tssr32119 3 142533480 to 142533483 3 + TSS region transcription start site region 32119
Tssr32120 3 142539110 to 142539133 23 + TSS region transcription start site region 32120
Tssr32121 3 142541557 to 142541569 12 + TSS region transcription start site region 32121