Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:141838771-142499616

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bmpr1b 3 141837136 to 142169425 332289 - protein coding gene bone morphogenetic protein receptor, type 1B
Tssr35918 3 141931404 to 141931439 35 - TSS region transcription start site region 35918
Tssr35919 3 141931484 to 141931498 14 - TSS region transcription start site region 35919
Tssr35920 3 141931554 to 141931565 11 - TSS region transcription start site region 35920
Tssr35921 3 141931566 to 141931576 10 - TSS region transcription start site region 35921
Tssr35922 3 141931877 to 141931880 3 - TSS region transcription start site region 35922
Tssr35923 3 141982206 to 141982221 15 - TSS region transcription start site region 35923
Tssr35924 3 141982224 to 141982237 13 - TSS region transcription start site region 35924
Tssr32046 3 142000682 to 142000686 4 + TSS region transcription start site region 32046
D3Mit160 3 142041478 to 142041614 136 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 160
D3Mit160.2 3 142041591 to 142041746 155 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 160.2
Tssr35925 3 142108450 to 142108465 15 - TSS region transcription start site region 35925
Tssr35926 3 142144757 to 142144771 14 - TSS region transcription start site region 35926
Tssr35927 3 142150091 to 142150097 6 - TSS region transcription start site region 35927
Cpgi13885 3 142168771 to 142169616 845 CpG island CpG island 13885
Tssr35928 3 142169196 to 142169261 65 - TSS region transcription start site region 35928
Tssr35929 3 142169311 to 142169329 18 - TSS region transcription start site region 35929
D3Mit112 3 142177450 to 142177587 137 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 112
Gm6059 3 142184412 to 142184751 339 - pseudogene predicted gene 6059
Pdlim5 3 142239590 to 142395696 156106 - protein coding gene PDZ and LIM domain 5
Tssr35930 3 142249552 to 142249561 9 - TSS region transcription start site region 35930
Tssr35931 3 142249660 to 142249667 7 - TSS region transcription start site region 35931
Tssr35932 3 142249680 to 142249689 9 - TSS region transcription start site region 35932
Tssr35933 3 142285441 to 142285444 3 - TSS region transcription start site region 35933
Tssr35934 3 142364276 to 142364281 5 - TSS region transcription start site region 35934
Tssr35935 3 142367292 to 142367293 1 - TSS region transcription start site region 35935
Tssr35936 3 142385005 to 142385012 7 - TSS region transcription start site region 35936
Cpgi13886 3 142394785 to 142396093 1308 CpG island CpG island 13886
Tssr35937 3 142395627 to 142395653 26 - TSS region transcription start site region 35937
Tssr35938 3 142395661 to 142395683 22 - TSS region transcription start site region 35938
D3Mit257 3 142428548 to 142428672 124 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 257
D3Mit126 3 142428548 to 142428698 150 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 126
Tssr35939 3 142430174 to 142430188 14 - TSS region transcription start site region 35939
Gm33189 3 142433740 to 142438896 5156 + lncRNA gene predicted gene, 33189
Tssr32047 3 142496772 to 142496789 17 + TSS region transcription start site region 32047
Tssr32048 3 142496791 to 142496804 13 + TSS region transcription start site region 32048
Tssr32049 3 142496815 to 142496830 15 + TSS region transcription start site region 32049
Tssr32050 3 142496873 to 142496892 19 + TSS region transcription start site region 32050
Tssr32051 3 142496924 to 142496939 15 + TSS region transcription start site region 32051
Gbp5 3 142496934 to 142522344 25410 + protein coding gene guanylate binding protein 5